HHsearch alignment for GI: 254780606 and conserved domain: cd04104

>cd04104 p47_IIGP_like p47 (47-kDa) family. The p47 GTPase family consists of several highly homologous proteins, including IGTP, TGTP/Mg21, IRG-47, GTPI, LRG-47, and IIGP1. They are found in higher eukaryotes where they play a role in immune resistance against intracellular pathogens. p47 proteins exist at low resting levels in mouse cells, but are strongly induced by Type II interferon (IFN-gamma). ITGP is critical for resistance to Toxoplasma gondii infection and in involved in inhibition of Coxsackievirus-B3-induced apoptosis. TGTP was shown to limit vesicular stomatitis virus (VSV) infection of fibroblasts in vitro. IRG-47 is involved in resistance to T. gondii infection. LRG-47 has been implicated in resistance to T. gondii, Listeria monocytogenes, Leishmania, and mycobacterial infections. IIGP1 has been shown to localize to the ER and to the Golgi membranes in IFN-induced cells and inflamed tissues. In macrophages, IIGP1 interacts with hook3, a microtubule binding protei
Probab=95.33  E-value=0.011  Score=37.28  Aligned_cols=20  Identities=45%  Similarity=0.687  Sum_probs=18.4

Q ss_pred             CEEEEECCCCCHHHHHHHHH
Q ss_conf             46997078753447999999
Q gi|254780606|r  414 HILVAGTTGSGKSVAINTMI  433 (744)
Q Consensus       414 H~lvaG~TgsGKS~~l~~~i  433 (744)
T Consensus         3 ~iaVtGesGaGKSSfINAlR   22 (197)
T cd04104           3 NIAVTGESGAGKSSFINALR   22 (197)
T ss_pred             EEEEECCCCCCHHHHHHHHH
T ss_conf             79995589986899999986