HHsearch alignment for GI: 254780606 and conserved domain: pfam00270
>pfam00270 DEAD DEAD/DEAH box helicase. Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Probab=94.95 E-value=0.077 Score=31.61 Aligned_cols=43 Identities=21% Similarity=0.310 Sum_probs=23.9
Q ss_pred HCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCC
Q ss_conf 1484699707875344799999999998568011079997234
Q gi|254780606|r 411 NMPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPK 453 (744)
Q Consensus 411 ~~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k 453 (744)
T Consensus 13 ~g~~~iv~~pTGsGKT~~~~~~~l~~~~~~~~~~~~v~l~Pt~ 55 (167)
T pfam00270 13 EGKDVLVQAPTGSGKTLAFLLPALQALLKNPDGPQALVLAPTR 55 (167)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHH
T ss_conf 6997899889997589999999999987477898799990608