HHsearch alignment for GI: 254780606 and conserved domain: pfam07088

>pfam07088 GvpD GvpD gas vesicle protein. This family consists of several archaeal GvpD gas vesicle proteins. GvpD is thought to be involved in the regulation of gas vesicle formation.
Probab=94.44  E-value=0.068  Score=32.00  Aligned_cols=80  Identities=18%  Similarity=0.193  Sum_probs=43.1

Q ss_pred             EEEEHHHHHHHHH------HCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCHHHCCHH
Q ss_conf             9998445687675------3103589999999996420135899985165444414678850563057203681110032
Q gi|254780606|r  531 IVIIVDEMADLMM------VAGKEIEGAIQRLAQMARAAGIHLIMATQRPSVDVITGTIKANFPIRISFQVTSKIDSRTI  604 (744)
Q Consensus       531 ivvviDE~a~l~~------~~~~~~e~~~~~la~~~ra~GihlilatQrp~~~vi~~~ik~n~~~ri~~~v~~~~dsr~i  604 (744)
T Consensus       108 ~~Ia~DSW~~i~eyLa~r~d~pe~f~~~~n~lv~lar~~g~~Li~v~E~~~~~~LeY----ivDGVVtL~vk~d~~GR~~  183 (484)
T pfam07088       108 LTIAFDSWELIYEYLAERHDIPPDILTVTNQLVALARGSGARLVLVLETAQNSRLEY----IVDGVVTLNVKNDERGRTR  183 (484)
T ss_pred             CEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHH----EEEEEEEEEEEECCCCCEE
T ss_conf             479983289999987776168466756665677766525945999982366775121----2303899988625678376


Q ss_pred             CCCCCHHHHCC
Q ss_conf             67631688568
Q gi|254780606|r  605 LGEHGAEQLLG  615 (744)
Q Consensus       605 l~~~gae~l~g  615 (744)
T Consensus       184 -R~L~LeKLRG  193 (484)
T pfam07088       184 -RSLRLEKLRG  193 (484)
T ss_pred             -EEEEHHHHCC
T ss_conf             -7767234227