HHsearch alignment for GI: 254780606 and conserved domain: pfam10443
>pfam10443 RNA12 RNA12 protein. This family includes RNA12 from S. cerevisiae. That protein contains an RRM domain. This region is C-terminal to that and includes a P-loop motif suggesting this region binds to NTP. The RNA12 proteins is involved in pre-rRNA maturation.
Probab=92.69 E-value=0.58 Score=25.61 Aligned_cols=54 Identities=17% Similarity=0.212 Sum_probs=31.2
Q ss_pred HHHHHHHHH-CCCEEEEEEECCCCCCHHH-HHHHHHHHHHCCCCCHHHCCC-CCCCE
Q ss_conf 999999997-4986232200000100789-999999999879757021688-62321
Q gi|254780606|r 686 AKAVDLVID-NQRCSTSFIQRRLQIGYNR-AALLVERMEQEGLVSEADHVG-KRHVF 739 (744)
Q Consensus 686 ~~~~~~~~~-~~~~s~s~~qr~~~~g~~r-a~~~~~~~e~~g~~~~~~~~~-~r~~~ 739 (744)
T Consensus 320 eQaW~lIk~La~~~~v~Y~~ll~~~lFk~~~E~~l~~LE~aeLIsv~~~~Grp~~I~ 376 (428)
T pfam10443 320 EQAWELIKKLSKNGSIPYNELLLSPLFKGSGETALRALEQAELISVTRDNGRPSKIR 376 (428)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCC
T ss_conf 999999999713895319998843102698279999998679479982488356654