HHsearch alignment for GI: 254780606 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=97.83 E-value=0.00014 Score=50.32 Aligned_cols=141 Identities=17% Similarity=0.183 Sum_probs=68.9
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEECCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHH
Q ss_conf 48469970787534479999999999856801107999723421000125775200004444178768999999866769
Q gi|254780606|r 412 MPHILVAGTTGSGKSVAINTMIMSLLYRLRPDECRMIMVDPKMLELSVYDGIPHLLTPVVTNPKKAVMALKWAVREMEER 491 (744)
Q Consensus 412 ~PH~lvaG~TgsGKS~~l~~~i~sl~~~~~p~~~~~~liD~k~~~~~~~~~~ph~~~~v~~~~~~~~~~l~~~~~em~~r 491 (744)
T Consensus 2 ~~~ill~G~~GsGKTtl~~~la~~~~~~~----~~v~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~ 63 (148)
T smart00382 2 GEVILIVGPPGSGKTTLARALARELGPPG----GGVIYIDGEDILEEVLDQLL--------------LIIVGGKKASGSG 63 (148)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHCCCC----CCEEEEEHHHHHHHHHHHHH--------------HHHHCCCCCCCCH
T ss_conf 97899999997029999999998726689----96899875998988898765--------------3000112210519
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHH---HHHHHHHHHCCEEEEE
Q ss_conf 9999980778679999988642026776665432338679998445687675310358999---9999996420135899
Q gi|254780606|r 492 YRKMSHLSVRNIKSYNERISTMYGEKPQGCGDDMRPMPYIVIIVDEMADLMMVAGKEIEGA---IQRLAQMARAAGIHLI 568 (744)
Q Consensus 492 ~~~~~~~~~~~i~~~n~~~~~~~~~~~~~~~~~~~~~p~ivvviDE~a~l~~~~~~~~e~~---~~~la~~~ra~Gihli 568 (744)
T Consensus 64 ~--------~~~~~~~~~~~---------------~~~~~viiiDei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 120 (148)
T smart00382 64 E--------LRLRLALALAR---------------KLKPDVLILDEITSLLDAEQEALLLLLEELRLLLLLKSEKNLTVI 120 (148)
T ss_pred H--------HHHHHHHHHHH---------------HCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 9--------99999999998---------------449989998275021476207999999999985176578998999
Q ss_pred EEECCCCCCCCHHHHHHCCCCEEEEE
Q ss_conf 98516544441467885056305720
Q gi|254780606|r 569 MATQRPSVDVITGTIKANFPIRISFQ 594 (744)
Q Consensus 569 latQrp~~~vi~~~ik~n~~~ri~~~ 594 (744)
T Consensus 121 ~~~n~-~~~~~~~~~~~~~~~~~~~~ 145 (148)
T smart00382 121 LTTND-EKDLGPALLRRRFDRRIVLL 145 (148)
T ss_pred EEECC-CCCCCHHHHCCCCCEEEEEE
T ss_conf 95699-52249877074478799982