HHsearch alignment for GI: 254780607 and conserved domain: COG4461
>COG4461 LprI Uncharacterized protein conserved in bacteria, putative lipoprotein [Function unknown].
Probab=99.23 E-value=6.6e-11 Score=84.46 Aligned_cols=97 Identities=15% Similarity=0.369 Sum_probs=81.7
Q ss_pred CCHHHHHHHHHHHHH---HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 925999999999963---10122023788998999999999999999999999999997329356899999999999999
Q gi|254780607|r 1 MCRKIIFALTIIAIA---FQSMALNCNETLMQADMNQCTGNSFALVKEKLEATYKKVLEKVEKHQRELFEKSQMAWEIYR 77 (131)
Q Consensus 1 m~k~il~~~~~~~~s---~~a~a~dC~~a~t~~e~~~C~~~~~~~ad~~Ln~~y~~l~~~l~~~~~~~L~~sQr~W~~~R 77 (131)
T Consensus 1 ~la~~L~gg~ll~p~~l~a~aaSfDC~KA~~~vEkaICan~~L~~lD~~~~t~Y~ql~---a~~~~~~lr~~qq~Wlk~r 77 (185)
T COG4461 1 VLALLLLGGALLTPLSLTASAASFDCTKASTPVEKAICANRQLNDLDVTLSTAYQQLF---AMGRRGALRDAQQSWLKLR 77 (185)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHH
T ss_conf 9379975346650577630445536666564257775177423067899999999987---1443377999999999988
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99788755124688356799999999999999999999
Q gi|254780607|r 78 GSECAFAASGAEEGTAQSMIYANCLQGHAIERNEKLES 115 (131)
Q Consensus 78 ~~~C~~~~~~~~~Gs~~~~~~~~C~~~~t~~R~~eL~~ 115 (131)
T Consensus 78 ~~-C~sDt--------------dcl~~AY~~ri~qL~~ 100 (185)
T COG4461 78 NA-CASDT--------------DCLQRAYEQRLAQLSK 100 (185)
T ss_pred HH-HCCCH--------------HHHHHHHHHHHHHHHC
T ss_conf 75-32213--------------8999999999999702