HHsearch alignment for GI: 254780608 and conserved domain: COG1189

>COG1189 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis].
Probab=97.46  E-value=0.00028  Score=47.06  Aligned_cols=51  Identities=18%  Similarity=0.256  Sum_probs=45.9

Q ss_pred             CCCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEE-CCCCCCCCCCEEEEE
Q ss_conf             866899999876788989999999849903887884-511211799889993
Q gi|254780608|r   18 NMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRV-KFNNRIQSGQVVRIP   68 (346)
Q Consensus        18 g~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~v-k~~~~v~~GD~I~i~   68 (346)
T Consensus         2 k~RLD~~Lv~rgl~~sR~~A~~~I~~G~V~Vng~~v~KP~~~V~~~~~i~v~   53 (245)
T COG1189           2 KMRLDALLVERGLFESREKAKELILAGNVLVNGEKVTKPSQLVDIDDEIEVK   53 (245)
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCEEECCCCEECCCCCEEEEC
T ss_conf             3238999997353320999999987685788999942765245898637875