HHsearch alignment for GI: 254780608 and conserved domain: COG2302
>COG2302 Uncharacterized conserved protein, contains S4-like domain [Function unknown].
Probab=97.94 E-value=1.8e-05 Score=54.58 Aligned_cols=54 Identities=22% Similarity=0.398 Sum_probs=48.6
Q ss_pred HHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEEC-CCCCCCCCCEEEEEC
Q ss_conf 1368668999998767889899999998499038878845-112117998899935
Q gi|254780608|r 15 DEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVK-FNNRIQSGQVVRIPP 69 (346)
Q Consensus 15 ~~~g~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~vk-~~~~v~~GD~I~i~~ 69 (346)
T Consensus 177 ~vsSlRLD~vis~~~-~~SR~~a~~lIe~g~VkVN~k~v~~~s~~v~~GDliSirG 231 (257)
T COG2302 177 TVSSLRLDVVISEGF-GLSRAKAQQLIEKGKVKVNWKVVDKASYEVQEGDLISIRG 231 (257)
T ss_pred EEEHHHHHHHHHHHH-HHHHHHHHHHHHCCCEEEEEEEECCCCCEECCCCEEEEEC
T ss_conf 421240799999887-6559999998773732771299126663322498999840