HHsearch alignment for GI: 254780608 and conserved domain: COG2501

>COG2501 S4-like RNA binding protein [Replication, recombination, and repair].
Probab=94.53  E-value=0.099  Score=30.98  Aligned_cols=51  Identities=20%  Similarity=0.282  Sum_probs=41.3

Q ss_pred             CCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEE-CCCCCCCCCCEEEEEC
Q ss_conf             66899999876788989999999849903887884-5112117998899935
Q gi|254780608|r   19 MRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRV-KFNNRIQSGQVVRIPP   69 (346)
Q Consensus        19 ~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~v-k~~~~v~~GD~I~i~~   69 (346)
T Consensus        12 I~L~qlLK~~g~i~sGG~AK~~i~eg~V~vNGe~EtRRgkKlr~gd~V~i~~   63 (73)
T COG2501          12 ITLGQLLKLAGLIESGGQAKAFIAEGEVKVNGEVETRRGKKLRDGDVVEIPG   63 (73)
T ss_pred             EEHHHHHHHHCCCCCCHHHHHHHHCCEEEECCEEECCCCCEEECCCEEEECC
T ss_conf             8799999874950574788899877918988866301677601698999899