HHsearch alignment of GI: 254780608 and MMDB domain: 1ksk_A_1-58
>1ksk_A (A:1-58) Ribosomal small subunit pseudouridine synthase A; RSUA, lyase; 2.00A {Escherichia coli}
Probab=98.58 E-value=8.2e-08 Score=68.91 Aligned_cols=51 Identities=18% Similarity=0.254 Sum_probs=46.7
Q ss_pred CCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEE-CCCCCCCCCCEEEEE
Q ss_conf 6866899999876788989999999849903887884-511211799889993
Q gi|254780608|r 17 ENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRV-KFNNRIQSGQVVRIP 68 (346)
Q Consensus 17 ~g~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~v-k~~~~v~~GD~I~i~ 68 (346)
..+|||+||++.. ..||++++++|+.|.|+|||+++ ++++.|..||.|.+.
T Consensus 2 ~~~RLDk~L~~~~-~~SR~~a~~lI~~g~V~Vng~~v~~~~~~v~~~d~I~i~ 53 (58)
T 1ksk_A 2 SHXRLDKFIAQQL-GVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYD 53 (58)
T ss_dssp CCEEHHHHHHHHH-TCCHHHHHHHHHTTCEEETTEECCCTTCEECTTCCEEET
T ss_pred CCCHHHHHHHHCC-CCCHHHHHHHHHCCCEEECCEECCCCCCEECCCCEEEEE
T ss_conf 8400999998778-968999999998892999999946688580786769972