HHsearch alignment of GI: 254780608 and MMDB domain: 1p9k_A_

>1p9k_A (A:) ORF, hypothetical protein; alfal motif, RNA-binding protein, E.coli, montreal-kingston bacterial structural genomics initiative, BSGI; NMR {Escherichia coli K12}

Probab=98.90  E-value=4.7e-10  Score=83.07  Aligned_cols=69  Identities=17%  Similarity=0.063  Sum_probs=60.1

Q ss_pred             CCCCCCEEEEEECHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEE-CCCCCCCCCCEEEEEC
Q ss_conf             97668304999841136866899999876788989999999849903887884-5112117998899935
Q gi|254780608|r    1 MSLMTYVQYVVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRV-KFNNRIQSGQVVRIPP   69 (346)
Q Consensus         1 ~~~M~~~~~~~V~~~~~g~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~v-k~~~~v~~GD~I~i~~   69 (346)
                      |+-|+.....++.....++|||+||++.....||++++++|..|.|+|||+++ +++++|..||.|.+..
T Consensus         3 m~~~~~~~~~~~~~~~~~~RLd~~L~~~~~~~SR~~a~~~I~~G~V~VNg~~v~~~~~~v~~gd~I~i~~   72 (79)
T 1p9k_A            3 MIHRMSNMATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAG   72 (79)
T ss_dssp             CCCSSCCCCEEECCSCSCCCHHHHHHHHTSCSSSSTTSHHHHHHHHEETTBCCCCSSCCCCSSEEEEETT
T ss_pred             HHHCCCCCCEEECCCCCCEEHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCCCCCCCEEEECC
T ss_conf             1000147713864999719799999877883689999999984997989999277887989999999999