HHsearch alignment of GI: 254780608 and MMDB domain: 3kbg_A_1-81
>3kbg_A (A:1-81) 30S ribosomal protein S4E; RPS4E, RS4E_theac, TAR28, NESG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.75A {Thermoplasma acidophilum}
Probab=90.41 E-value=0.42 Score=26.60 Aligned_cols=53 Identities=21% Similarity=0.258 Sum_probs=42.8
Q ss_pred HCCCCHHHHHHHHCCCC-CHHHHHHHHHCCCCEECCEEEC-CCCCCCCCCEEEEE
Q ss_conf 36866899999876788-9899999998499038878845-11211799889993
Q gi|254780608|r 16 EENMRLDRWFKNHYPHI-NFVNLQKILRSGQVRVDKKRVK-FNNRIQSGQVVRIP 68 (346)
Q Consensus 16 ~~g~RLd~~L~~~~~~~-sr~~~~~lir~G~V~VNG~~vk-~~~~v~~GD~I~i~ 68 (346)
..++.|--||.+.++.. +...+++.+.+|.|.|||++.+ ..+.+-.-|+|+|+
T Consensus 5 ~~siPL~i~LRd~Lk~A~t~rEak~Il~~~~V~VDGkvr~D~~~pvG~mDVIsi~ 59 (81)
T 3kbg_A 5 DQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFXDVIEIN 59 (81)
T ss_dssp CSCEEHHHHHHHHHHTTTCGGGHHHHHHTTCEEETTEECCCTTCEECTTCEEEET
T ss_pred CCCCCCHHHHHHHHCCCCCHHHHHHHHHCCEEEECCEEECCCCCCCCEEEEEEEC
T ss_conf 1256543786446452265899999986793898999962389988706799979