HHsearch results for GI: 254780608 and protein with PDBid: 2aus_C
>2aus_C Pseudouridine synthase; isomerase, structural protein, isomerase/structural protein complex; 2.10A {Pyrococcus abyssi} PDB: 3lwr_A 3lwo_A* 3lwq_A* 3lwp_A 3lwv_A 3hax_A* 2hvy_A* 3hay_A* 2ey4_A 2rfk_A 3hjw_A* 3hjy_A
Probab=95.79 E-value=0.0039 Score=38.47 Aligned_cols=71 Identities=24% Similarity=0.308 Sum_probs=47.3
Q ss_pred CCCEEEECCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf 78568841765311223578533233201101111100133354453422240462123101222102333322111200
Q gi|254780608|r 105 DSKIYVFNKPAGISVQGGSGIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYW 184 (346)
Q Consensus 105 D~~livinKPaGl~vhp~~g~~~~~~~~l~~~~~~~~~~~~lVHRLDr~TSGlll~AK~~~a~~~l~~~f~~~~v~K~Y~ 184 (346)
...+|+||||.|+.+|- +...+..... ..+.+-..=||-..||||++|-+. +.+.++.. .+ -.|+|.
T Consensus 45 ~~G~l~i~KP~g~tS~~-------~v~~~k~~~~--~~KvGH~GTLDP~AsGvL~i~ig~-aTk~~~~~-~~--~~K~Y~ 111 (334)
T 2aus_C 45 QYGVINLDKPPGPTSHE-------VVAWIKRILN--LEKAGHGGTLDPKVSGVLPVALER-ATRVVQAL-LP--AGKEYV 111 (334)
T ss_dssp HTEEEEEEECSSSCHHH-------HHHHHHHHTT--CSCEEESSCCCTTCEEEEEEEEGG-GGGGGGGG-TT--CCEEEE
T ss_pred CCCEEEEECCCCCCHHH-------HHHHHHHHHC--CCCCCCCCCCCCCCEEEEEEEECH-HHHHHHHH-CC--CCCEEE
T ss_conf 77089995699899899-------9999998736--121379999999773789999878-98686987-56--981899
Q ss_pred CCCC
Q ss_conf 0134
Q gi|254780608|r 185 SLVW 188 (346)
Q Consensus 185 Aiv~ 188 (346)
|.+.
T Consensus 112 ~~~~ 115 (334)
T 2aus_C 112 ALMH 115 (334)
T ss_dssp EEEE
T ss_pred EEEE
T ss_conf 9998