HHsearch results for GI: 254780608 and protein with PDBid: 2olw_A
>2olw_A Ribosomal large subunit pseudouridine synthase E; bifurcated beta sheet, isomerase; 1.60A {Escherichia coli}
Probab=100.00 E-value=6.8e-34 Score=232.41 Aligned_cols=163 Identities=21% Similarity=0.235 Sum_probs=109.5
Q ss_pred EEEECCCEEEECCCCCCEEECCCCCC-CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCC
Q ss_conf 78617856884176531122357853-32332011011111001333544534222404621231012221023333221
Q gi|254780608|r 101 LLYEDSKIYVFNKPAGISVQGGSGIA-YHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRI 179 (346)
Q Consensus 101 IiyED~~livinKPaGl~vhp~~g~~-~~~~~~l~~~~~~~~~~~~lVHRLDr~TSGlll~AK~~~a~~~l~~~f~~~~v 179 (346)
+..|+..+|++|||+|++||+..+.. .++.+++ . ..+.++|||||++||||||||++.+++..+..+ .+.+
T Consensus 34 ~~~~~~~~iv~NKP~G~l~~~~d~~~~~tl~~~l----~--~~~l~~VhRLDrdTSGLll~akd~~~~~~l~~~--~~~i 105 (217)
T 2olw_A 34 PENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFI----P--VQGVYAAGRLDRDSEGLLVLTNNGALQARLTQP--GKRT 105 (217)
T ss_dssp ---CCCCEEEEEECTTBCSCSSCCTTSBCGGGTC----C--CCSCEESSCCCTTCEEEEEEESCHHHHHHHHCT--TCCC
T ss_pred CCCCCCEEEEEECCCCEEECCCCCCCCCCHHHHC----C--CCCCEECCCCCCCCCCEEEEECCHHHHHHHCCC--CCEE
T ss_conf 8889998999989998487477998897689966----8--458348755786778818982776787653268--7615
Q ss_pred CCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCEEEEEECHHHHHHHHH
Q ss_conf 1120001345654100000--00122346554321113355555553034301013432024420457861237899999
Q gi|254780608|r 180 QKIYWSLVWGIPKNKKECI--ANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRV 257 (346)
Q Consensus 180 ~K~Y~Aiv~G~~~~~~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~k~a~T~~~vl~~~~~~~slv~~~l~TGR~HQIRv 257 (346)
.|+|+|+|.|.+.+..... .+....+....... ...........+.+.+... ..+..+|++++.|.||||||||+
T Consensus 106 ~K~Y~a~v~g~~~~~~~~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~s~l~i~l~tGRtHQIR~ 182 (217)
T 2olw_A 106 GKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAG--AELVDEPAWLWPRNPPIRE-RKSIPTSWLKITLYEGRNRQVRR 182 (217)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHCCEETTEECCCCE--EEEECCCTTCCCCSSCCC--CCSSCEEEEEEEESCCCTTHHHH
T ss_pred EEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCE--EEEECCCCCCCCEEEEEEE-ECCCCEEEEEEEEECCCHHHHHH
T ss_conf 68999999347999999998769823786033316--9995266442301136886-21576068999962485499999
Q ss_pred HHHHCCCCEECCCC--CCC
Q ss_conf 99963980004644--466
Q gi|254780608|r 258 HALHMGCPIVGDHK--YCA 274 (346)
Q Consensus 258 hl~~~g~PivGD~~--Yg~ 274 (346)
||+++||||++..+ ||+
T Consensus 183 hl~~lG~pI~~L~Ri~~G~ 201 (217)
T 2olw_A 183 MTAHVGFPTLRLIRYAMGD 201 (217)
T ss_dssp HHHHTTCCEEEEEEEEETT
T ss_pred HHHHCCCEEEEEEEEEECC
T ss_conf 9998699798989999999