HHSEARCH alignment of GI: 254780608 and SCOP domain: d1c06a_

Alignment
>d1c06a_ d.66.1.2 (A:) Ribosomal protein S4 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.80  E-value=2.3e-05  Score=50.99  Aligned_cols=51  Identities=22%  Similarity=0.290  Sum_probs=43.9

Q ss_pred             CCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEEC-CCCCCCCCCEEEEEC
Q ss_conf             668999998767889899999998499038878845-112117998899935
Q gi|254780608|r   19 MRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVK-FNNRIQSGQVVRIPP   69 (346)
Q Consensus        19 ~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~vk-~~~~v~~GD~I~i~~   69 (346)
                      +|||..+-+.==..|+.++++++..|.|.|||+++. |++.|++||+|.+..
T Consensus        51 ~RlD~vv~r~gfa~t~~~arQ~v~Hghi~vNgk~v~iPSy~vk~GDvIsvke  102 (159)
T d1c06a_          51 SRLDNLVYRLGLARTRRQARQLVTHGHILVDGSRVNIPSYRVKPGQTIAVRE  102 (159)
T ss_dssp             HCHHHHHHHHTSSSSHHHHHHHHHTSCEEETTEECCCSSCCCCSSCEEEECG
T ss_pred             HHHHHHHCCCCCCCCHHHHHHHHHHCCEECCCEEEEECCEEECCCCEEEECC
T ss_conf             8754551057632788889988873563713359985121522784886120


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Ribosomal protein S4
domain: Ribosomal protein S4
species: Bacillus stearothermophilus [TaxId: 1422]