HHSEARCH alignment of GI: 254780608 and SCOP domain: d1h3fa2

Alignment

Probab=95.25  E-value=0.011  Score=34.04  Aligned_cols=56  Identities=11%  Similarity=0.140  Sum_probs=40.2

Q ss_pred             EEECHHH---CCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEECCEEEC-CCCCCCCCCEE
Q ss_conf             9984113---68668999998767889899999998499038878845-11211799889
Q gi|254780608|r   10 VVVENDE---ENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVK-FNNRIQSGQVV   65 (346)
Q Consensus        10 ~~V~~~~---~g~RLd~~L~~~~~~~sr~~~~~lir~G~V~VNG~~vk-~~~~v~~GD~I   65 (346)
                      +.++..+   .++.|..+|...=-.-|++.++++|++|.|+|||.++. +++.+..++.+
T Consensus         6 ~~i~~~~~~~~~i~l~~ll~~~gl~~S~searRlI~~g~V~iN~~ki~d~~~~l~~~~~~   65 (81)
T d1h3fa2           6 VTIPASELKEGRIWVARLFTLAGLTPSNAEARRLIQNRGLRLDGEVLTDPMLQVDLSRPR   65 (81)
T ss_dssp             EEECGGGCBTTEEEHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEECCCTTCEEECSSCE
T ss_pred             EEECHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEE
T ss_conf             894488944686119999998297768899999998698898999933856255379969

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain
domain: Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain
species: Thermus thermophilus [TaxId: 274]