Probab=99.87 E-value=3.6e-23 Score=163.28 Aligned_cols=144 Identities=17% Similarity=0.215 Sum_probs=99.5 Q ss_pred EEEECCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCC Q ss_conf 68841765311223578533233201101111100133354453422240462123101222102333322111200013 Q gi|254780608|r 108 IYVFNKPAGISVQGGSGIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSLV 187 (346) Q Consensus 108 livinKPaGl~vhp~~g~~~~~~~~l~~~~~~~~~~~~lVHRLDr~TSGlll~AK~~~a~~~l~~~f~~~~v~K~Y~Aiv 187 (346) ++++|||+|+.|+........+.+.+ ......+..+|||||++|||+|||+.+.+.++.|.... ..+.|+|+|.| T Consensus 3 yi~lNKP~G~l~s~~~~~~~~~~~~l---~~~~~~~l~~vgRLD~~tsGLlL~tndg~~~~~l~~~~--~~i~k~Y~v~v 77 (172) T d1kska4 3 YFMLNKPQGYVCSTDDPDHPTVLYFL---DEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHRITSPR--HHCEKTYLVTL 77 (172) T ss_dssp EEEEEECTTCBSSSSCSSSCBGGGGC---CCTTGGGCEESSCCCTTCEEEEEEESCHHHHHHHHCTT--SCCCEEEEEEE T ss_pred EEEEECCCCEEECCCCCCCCCEEEEC---CCCCCCCEEEEECCCCCCCCCEEEECCCCEEEEECCCC--CCCCEEEEEEE T ss_conf 99998999789797398999378865---75236767896137860036399904564154311223--24627999998 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCEE Q ss_conf 45654100000001223465543211133555555530343010134320244204578612378999999996398000 Q gi|254780608|r 188 WGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIV 267 (346) Q Consensus 188 ~G~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~a~T~~~vl~~~~~~~slv~~~l~TGR~HQIRvhl~~~g~Piv 267 (346) .|.+..... . .+.+ .+ .-++..+.+.+..++... . +.+++.+.|||+||||+||+++|+||+ T Consensus 78 ~~~i~~~~~--~-~l~~----------gv---~i~~~~~~~~~~~v~~~~-~-~~l~i~l~~Gr~~qIR~~~~~lg~~V~ 139 (172) T d1kska4 78 ESPVADDTA--E-QFAK----------GV---QLHNEKDLTKPAVLEVIT-P-TQVRLTISEGRYHQVKRMFAAVGNHVV 139 (172) T ss_dssp SSCCCTTHH--H-HHHH----------CC---CCTTCSSCCCCCEEEEEE-T-TEEEEEESCCCTTHHHHHHHHTTCCEE T ss_pred ECCCCHHHH--H-HHHC----------CE---EECCCCCCCCCEEEEECC-C-CEEEEEEECCCCHHHHHHHHHCCCEEE T ss_conf 226897898--8-8636----------55---776851111525885146-7-599999944853899999997598894 Q ss_pred C--CCCCCC Q ss_conf 4--644466 Q gi|254780608|r 268 G--DHKYCA 274 (346) Q Consensus 268 G--D~~Yg~ 274 (346) . -..||+ T Consensus 140 ~L~Rv~~G~ 148 (172) T d1kska4 140 ELHRERIGG 148 (172) T ss_dssp EEEEEEETT T ss_pred EEEEEEECC T ss_conf 999999836
class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase RsuA/RluD
domain: Ribosomal small subunit pseudouridine 516 synthase RsuA
species: Escherichia coli [TaxId: 562]