BLAST/PSIBLAST alignment of GI: 254780608 and GI: 190891935 at iteration 1
>gi|190891935|ref|YP_001978477.1| RNA-pseudouridine synthase, ribosomal large subunit C [Rhizobium etli CIAT 652] Length = 330
>gi|190697214|gb|ACE91299.1| RNA-pseudouridine synthase protein, ribosomal large subunit C [Rhizobium etli CIAT 652] Length = 330
Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 168/322 (52%), Positives = 231/322 (71%), Gaps = 3/322 (0%)
Query: 4 MTYVQYVVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQ 63
M ++++ VE DE MRLDRWFK H+P + F LQK+LRSGQVRVD RVK + R+Q GQ
Sbjct: 1 MAGIEHIKVEPDEAGMRLDRWFKVHFPGLGFGPLQKLLRSGQVRVDGGRVKSDARVQPGQ 60
Query: 64 VVRIPPVINALNHIIKEQKILDSSVNLTKHSDFLKSILLYEDSKIYVFNKPAGISVQGGS 123
VR+PP+ ++ +K I + + D L ++L+ED K+ V NKP GI+VQGGS
Sbjct: 61 TVRVPPL--DVDAKLKSGPIAGKDLKHSSDFDLLSRMVLHEDEKVIVLNKPPGIAVQGGS 118
Query: 124 GIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIY 183
G+A HID L++W KG+KPRL HRLD++TSG+LV+ARTR AAQ LT +FR R +K Y
Sbjct: 119 GVARHIDQMLEAWTSPKGEKPRLVHRLDRDTSGVLVIARTRGAAQKLTAAFRERDTKKTY 178
Query: 184 WSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWL 243
W+LV G+P+ ++ I+ WL+K++ GD + + K E GA++AIS ++V++ AQ WL
Sbjct: 179 WALVKGVPRKHEDKISTWLVKEATADGDRMRIAKHGEDGADHAISFYRVLETAAQNLAWL 238
Query: 244 EMQPHTGRTHQLRVHALHMGCPIVGDHKYCANFKG-NFTSPIQNKLYLHARYMDLPHPEG 302
EM+P+TGRTHQLRVHALH+G PI+GD KY + +F IQ KL+LHAR++D+PHP G
Sbjct: 239 EMEPYTGRTHQLRVHALHIGHPIIGDPKYFDDDPNWDFPGGIQKKLHLHARHIDIPHPSG 298
Query: 303 GRLQITAPLPAHMVKTWDSLGF 324
GRL+++APLP HMV+TW+ LG
Sbjct: 299 GRLRVSAPLPPHMVQTWNLLGL 320