BLAST/PSIBLAST alignment of GI: 254780608 and GI: 190891935 at iteration 1
>gi|190891935|ref|YP_001978477.1| RNA-pseudouridine synthase, ribosomal large subunit C [Rhizobium etli CIAT 652] Length = 330
>gi|190697214|gb|ACE91299.1| RNA-pseudouridine synthase protein, ribosomal large subunit C [Rhizobium etli CIAT 652] Length = 330
 Score =  365 bits (938), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 168/322 (52%), Positives = 231/322 (71%), Gaps = 3/322 (0%)

Query: 4   MTYVQYVVVENDEENMRLDRWFKNHYPHINFVNLQKILRSGQVRVDKKRVKFNNRIQSGQ 63
           M  ++++ VE DE  MRLDRWFK H+P + F  LQK+LRSGQVRVD  RVK + R+Q GQ
Sbjct: 1   MAGIEHIKVEPDEAGMRLDRWFKVHFPGLGFGPLQKLLRSGQVRVDGGRVKSDARVQPGQ 60

Query: 64  VVRIPPVINALNHIIKEQKILDSSVNLTKHSDFLKSILLYEDSKIYVFNKPAGISVQGGS 123
            VR+PP+   ++  +K   I    +  +   D L  ++L+ED K+ V NKP GI+VQGGS
Sbjct: 61  TVRVPPL--DVDAKLKSGPIAGKDLKHSSDFDLLSRMVLHEDEKVIVLNKPPGIAVQGGS 118

Query: 124 GIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIY 183
           G+A HID  L++W   KG+KPRL HRLD++TSG+LV+ARTR AAQ LT +FR R  +K Y
Sbjct: 119 GVARHIDQMLEAWTSPKGEKPRLVHRLDRDTSGVLVIARTRGAAQKLTAAFRERDTKKTY 178

Query: 184 WSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKGANYAISHFKVIDCFAQKFCWL 243
           W+LV G+P+  ++ I+ WL+K++   GD + + K  E GA++AIS ++V++  AQ   WL
Sbjct: 179 WALVKGVPRKHEDKISTWLVKEATADGDRMRIAKHGEDGADHAISFYRVLETAAQNLAWL 238

Query: 244 EMQPHTGRTHQLRVHALHMGCPIVGDHKYCANFKG-NFTSPIQNKLYLHARYMDLPHPEG 302
           EM+P+TGRTHQLRVHALH+G PI+GD KY  +    +F   IQ KL+LHAR++D+PHP G
Sbjct: 239 EMEPYTGRTHQLRVHALHIGHPIIGDPKYFDDDPNWDFPGGIQKKLHLHARHIDIPHPSG 298

Query: 303 GRLQITAPLPAHMVKTWDSLGF 324
           GRL+++APLP HMV+TW+ LG 
Sbjct: 299 GRLRVSAPLPPHMVQTWNLLGL 320