PSIBLAST alignment of GI: 254780608 and protein with PDB id: 1v9k
>gi|49259509|pdb|1V9K|A Chain A, The Crystal Structure Of The Catalytic Domain Of Pseudouridine Synthase Rluc From Escherichia Coli Length = 228
>gi|49259510|pdb|1V9K|B Chain B, The Crystal Structure Of The Catalytic Domain Of Pseudouridine Synthase Rluc From Escherichia Coli Length = 228
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 9/227 (3%)
Query: 99 SILLYEDSKIYVFNKPAGISVQGGSGIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGIL 158
++ YED I V NKP+G +V GGSG+++ + L++ + + L HRLD++TSG+L
Sbjct: 2 DVIXYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALR-PEARFLELVHRLDRDTSGVL 60
Query: 159 VVARTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQ 218
+VA+ R+A + L E R + QK Y +LV G ++ + + LLK G+ + V Q
Sbjct: 61 LVAKKRSALRSLHEQLREKGXQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQ 120
Query: 219 NEKGANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIVGDHKYCA---N 275
K + ++ + P TGRTHQ+RVH + G PI D +Y +
Sbjct: 121 EGKPSET----RFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFD 176
Query: 276 FKGNFTSPIQNKLYLHARYMDLPHPEGGRL-QITAPLPAHMVKTWDS 321
+ N+L+LHA + HP G + +I AP + +
Sbjct: 177 RQLTEAGTGLNRLFLHAAALKFTHPGTGEVXRIEAPXDEGLKRCLQK 223