RPSBLAST alignment for GI: 254780608 and conserved domain: PRK11180
>gnl|CDD|183020 PRK11180, rluD, 23S rRNA pseudouridine synthase D; Provisional. Length = 325
Score = 93.2 bits (232), Expect = 9e-20
Identities = 75/240 (31%), Positives = 118/240 (49%), Gaps = 31/240 (12%)
Query: 101 LLYEDSKIYVFNKPAGISVQGGSGIAYHIDGF----LKSWVDSKGQKPR--LTHRLDQET 154
++YED I V NKP + V G+G DG L + PR + HRLD++T
Sbjct: 86 IVYEDDDILVINKPRDLVVHPGAGNP---DGTVLNALLHYYPPIADVPRAGIVHRLDKDT 142
Query: 155 SGILVVARTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNK---KECIANWLLKKSHIGGD 211
+G++VVA+T A L E+ + R I + Y ++ G E I+ K++H+
Sbjct: 143 TGLMVVAKTVPAQTRLVEALQKREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMA-- 200
Query: 212 YVHVVKQNEKGANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIVGDHK 271
VH G A++H+++++ F + L ++ TGRTHQ+RVH H+ P+VGD
Sbjct: 201 -VH-----PMGKP-AVTHYRIMEHF-RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDQV 252
Query: 272 YCA------NFKGNFTSPIQN--KLYLHARYMDLPHP-EGGRLQITAPLPAHMVKTWDSL 322
Y F S ++ + LHA + L HP G ++ APLP MV+ ++L
Sbjct: 253 YGGRPRPPKGASEEFISTLRKFDRQALHATMLRLYHPITGIEMEWHAPLPQDMVELIEAL 312