RPSBLAST alignment for GI: 254780608 and conserved domain: PRK11180

>gnl|CDD|183020 PRK11180, rluD, 23S rRNA pseudouridine synthase D; Provisional. Length = 325
 Score = 93.2 bits (232), Expect = 9e-20
 Identities = 75/240 (31%), Positives = 118/240 (49%), Gaps = 31/240 (12%)

Query: 101 LLYEDSKIYVFNKPAGISVQGGSGIAYHIDGF----LKSWVDSKGQKPR--LTHRLDQET 154
           ++YED  I V NKP  + V  G+G     DG     L  +       PR  + HRLD++T
Sbjct: 86  IVYEDDDILVINKPRDLVVHPGAGNP---DGTVLNALLHYYPPIADVPRAGIVHRLDKDT 142

Query: 155 SGILVVARTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNK---KECIANWLLKKSHIGGD 211
           +G++VVA+T  A   L E+ + R I + Y ++  G         E I+    K++H+   
Sbjct: 143 TGLMVVAKTVPAQTRLVEALQKREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMA-- 200

Query: 212 YVHVVKQNEKGANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIVGDHK 271
            VH       G   A++H+++++ F +    L ++  TGRTHQ+RVH  H+  P+VGD  
Sbjct: 201 -VH-----PMGKP-AVTHYRIMEHF-RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDQV 252

Query: 272 YCA------NFKGNFTSPIQN--KLYLHARYMDLPHP-EGGRLQITAPLPAHMVKTWDSL 322
           Y             F S ++   +  LHA  + L HP  G  ++  APLP  MV+  ++L
Sbjct: 253 YGGRPRPPKGASEEFISTLRKFDRQALHATMLRLYHPITGIEMEWHAPLPQDMVELIEAL 312