RPSBLAST alignment of GI: 254780608 and SCOP domain: d1v9ka_

Alignment

 Score =  123 bits (309), Expect = 2e-29
 Identities = 74/225 (32%), Positives = 119/225 (52%), Gaps = 9/225 (4%)

Query: 102 LYEDSKIYVFNKPAGISVQGGSGIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVA 161
           +YED  I V NKP+G +V GGSG+++ +   L++    + +   L HRLD++TSG+L+VA
Sbjct: 4   MYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRP-EARFLELVHRLDRDTSGVLLVA 62

Query: 162 RTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEK 221
           + R+A + L E  R + +QK Y +LV G  ++  + +   LLK     G+ +  V Q  K
Sbjct: 63  KKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGK 122

Query: 222 GANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIVGDHKYCANFKGNFT 281
               + + FKV + +A     +   P TGRTHQ+RVH  + G PI  D +Y         
Sbjct: 123 ---PSETRFKVEERYAF-ATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQL 178

Query: 282 SPIQ---NKLYLHARYMDLPHPEGG-RLQITAPLPAHMVKTWDSL 322
           +      N+L+LHA  +   HP  G  ++I AP+   + +    +
Sbjct: 179 TEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKM 223

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase RsuA/RluD
domain: Ribosomal large subunit pseudouridine synthase C, RluC
species: Escherichia coli [TaxId: 562]