HHsearch alignment for GI: 254780610 and conserved domain: COG1188
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].
Probab=98.19 E-value=3.3e-06 Score=56.76 Aligned_cols=55 Identities=29% Similarity=0.487 Sum_probs=46.9
Q ss_pred HCCCCHHHHHHHH-CCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEEECC
Q ss_conf 3687578999987-176889899999998599049989932867580489889997056
Q gi|254780610|r 20 TAEGRIDRWLATS-LKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITVPA 77 (340)
Q Consensus 20 ~~g~RLD~~L~~~-l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd~I~i~~~~ 77 (340)
T Consensus 6 ~~~mRLDKwL~~aR~~--KrRslAk~~~~~GrV~vNG~~a-KpS~~VK~GD~l~i~~~~ 61 (100)
T COG1188 6 ADRMRLDKWLWAARFI--KRRSLAKEMIEGGRVKVNGQRA-KPSKEVKVGDILTIRFGN 61 (100)
T ss_pred CCCEEHHHHHHHHHHH--HHHHHHHHHHHCCEEEECCEEC-CCCCCCCCCCEEEEEECC
T ss_conf 6516567888788774--2289999998779698999675-655614779899999578