HHsearch alignment for GI: 254780610 and conserved domain: COG2501
>COG2501 S4-like RNA binding protein [Replication, recombination, and repair].
Probab=94.86 E-value=0.12 Score=29.49 Aligned_cols=52 Identities=23% Similarity=0.223 Sum_probs=41.3
Q ss_pred CCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEE
Q ss_conf 87578999987176889899999998599049989932867580489889997
Q gi|254780610|r 22 EGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLIT 74 (340)
Q Consensus 22 g~RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd~I~i~ 74 (340)
T Consensus 11 ~I~L~qlLK~~-g~i~sGG~AK~~i~eg~V~vNGe~EtRRgkKlr~gd~V~i~ 62 (73)
T COG2501 11 FITLGQLLKLA-GLIESGGQAKAFIAEGEVKVNGEVETRRGKKLRDGDVVEIP 62 (73)
T ss_pred EEEHHHHHHHH-CCCCCCHHHHHHHHCCEEEECCEEECCCCCEEECCCEEEEC
T ss_conf 18799999874-95057478889987791898886630167760169899989