HHsearch alignment for GI: 254780610 and conserved domain: PRK02193

Probab=96.81  E-value=0.002  Score=40.17  Aligned_cols=68  Identities=22%  Similarity=0.341  Sum_probs=46.4

Q ss_pred             EEEEECCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCC
Q ss_conf             78996240111045678754210022222210244334444364324444332324057212035788889999972113
Q gi|254780610|r   99 IIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKS  178 (340)
Q Consensus        99 llvinKPaGl~vhp~~~~~~~tl~~~l~~~~~~~~~~~~~~~~~~lVHRLDr~TSGlll~Ak~~~a~~~l~~~f~~~~~~  178 (340)
T Consensus         2 illi~KP~G~TS~--------~vv~~vkk~~~--------~kKvGH~GTLDP~AtGvL~v~~G~aT--K~~~~~~~----   59 (279)
T PRK02193          2 ITLLYKPKKISSF--------KFIRQFSKTNL--------IKKIGHAGTLDPLATGLLLVATDEDT--KLLDYLDQ----   59 (279)
T ss_pred             EEEEECCCCCCHH--------HHHHHHHHHHC--------CCCCCCCCCCCCCCEEEEEEEECHHH--HHCHHHCC----
T ss_conf             8999899989989--------99999999839--------99536174679867447999978665--12645545----


Q ss_pred             CCEEEEEEEEEE
Q ss_conf             221334454320
Q gi|254780610|r  179 TRLKRAYYAMVW  190 (340)
Q Consensus       179 ~~v~K~Y~Aiv~  190 (340)
T Consensus        60 --~~K~Y~~~~~   69 (279)
T PRK02193         60 --KTKTYLAKIQ   69 (279)
T ss_pred             --CCCEEEEEEE
T ss_conf             --7826999999