HHsearch alignment for GI: 254780610 and conserved domain: TIGR00478
>TIGR00478 tly hemolysin A; InterPro: IPR004538 Hemolysins are exotoxins that attack blood cell membranes and cause cell rupture. The mechanism of action is not well defined. Hemolysin A is induced by sodium ribonucleate, and is produced by pathogenic bacterial strains. Hemolysin A from Treponema hyodysenteriae causes swine dysentry.; GO: 0003723 RNA binding, 0019836 hemolysis by symbiont of host red blood cells.
Probab=97.58 E-value=0.00013 Score=47.33 Aligned_cols=53 Identities=25% Similarity=0.195 Sum_probs=47.7
Q ss_pred CHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEEECC
Q ss_conf 578999987176889899999998599049989932867580489889997056
Q gi|254780610|r 24 RIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITVPA 77 (340)
Q Consensus 24 RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd~I~i~~~~ 77 (340)
T Consensus 1 RLD~lLv~rgl~-~sR~~Ak~lI~kG~V~VN~~~v~KP~~~v~~~~~i~l~~~~ 53 (240)
T TIGR00478 1 RLDILLVKRGLV-ESREKAKRLILKGEVLVNKKKVDKPSALVDKDAKIELVQNP 53 (240)
T ss_pred CCHHHHHHHCHH-HHHHHHHHHHHCCCEEECCEEECCCCCEECCCCCEEEECCC
T ss_conf 903677650114-57899999987394555576520886044167603441477