HHsearch alignment of GI: 254780610 and MMDB domain: 1p9k_A_
>1p9k_A (A:) ORF, hypothetical protein; alfal motif, RNA-binding protein, E.coli, montreal-kingston bacterial structural genomics initiative, BSGI; NMR {Escherichia coli K12}
Probab=98.92 E-value=2e-10 Score=81.47 Aligned_cols=71 Identities=17% Similarity=0.131 Sum_probs=62.1
Q ss_pred CCHHCCCEEEEEECHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEEE
Q ss_conf 511016249999571136875789999871768898999999985990499899328675804898899970
Q gi|254780610|r 4 TLDNCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITV 75 (340)
Q Consensus 4 ~~~~~~~~~~~~V~~~~~g~RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd~I~i~~ 75 (340)
+|.+--......+.....++|||+||.+... ..||++++++|..|.|+|||++++++++.|.+||.|.+..
T Consensus 2 ~m~~~~~~~~~~~~~~~~~~RLd~~L~~~~~-~~SR~~a~~~I~~G~V~VNg~~v~~~~~~v~~gd~I~i~~ 72 (79)
T 1p9k_A 2 SMIHRMSNMATFSLGKHPHVELCDLLKLEGW-SESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAG 72 (79)
T ss_dssp CCCCSSCCCCEEECCSCSCCCHHHHHHHHTS-CSSSSTTSHHHHHHHHEETTBCCCCSSCCCCSSEEEEETT
T ss_pred CHHHCCCCCCEEECCCCCCEEHHHHHHHCCC-CCCHHHHHHHHHCCCEEECCEEECCCCCCCCCCCEEEECC
T ss_conf 5100014771386499971979999987788-3689999999984997989999277887989999999999