HHsearch alignment of GI: 254780610 and MMDB domain: 2aus_C_31-245
>2aus_C (C:31-245) Pseudouridine synthase; isomerase, structural protein, isomerase/structural protein complex; 2.10A {Pyrococcus abyssi} PDB: 3hax_A* 2hvy_A* 3hay_A* 2ey4_A 2rfk_A 3hjw_A* 3hjy_A
Probab=96.94 E-value=0.00048 Score=43.51 Aligned_cols=84 Identities=20% Similarity=0.240 Sum_probs=53.8
Q ss_pred CCCEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf 44027899624011104567875421002222221024433444436432444433232405721203578888999997
Q gi|254780610|r 95 EDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVD 174 (340)
Q Consensus 95 ED~~llvinKPaGl~vhp~~~~~~~tl~~~l~~~~~~~~~~~~~~~~~~lVHRLDr~TSGlll~Ak~~~a~~~l~~~f~~ 174 (340)
.-+.+|++|||.|+.+| .+++.+...+.. .+.+-..-||-..||+++++-+... .+.+.|.
T Consensus 14 ~~~G~l~~~KP~g~tS~--------~vv~~ik~~~~~--------~kvGh~GTLDp~atGvl~i~vg~aT--kl~~~~~- 74 (215)
T 2aus_C 14 IQYGVINLDKPPGPTSH--------EVVAWIKRILNL--------EKAGHGGTLDPKVSGVLPVALERAT--RVVQALL- 74 (215)
T ss_dssp HHTEEEEEEECSSSCHH--------HHHHHHHHHTTC--------SCEEESSCCCTTCEEEEEEEEGGGG--GGGGGGT-
T ss_pred HCCCEEEEECCCCCCHH--------HHHHHHHHHHCC--------CCCCCCCCCCCCCCCCEEEEECHHH--HHHHHHC-
T ss_conf 47838999579989999--------999999987183--------4257898789865034767873899--8999974-
Q ss_pred HCCCCCEEEEEEEEEECCCCCCCCCCCC
Q ss_conf 2113221334454320243323321100
Q gi|254780610|r 175 HGKSTRLKRAYYAMVWGIPLPDSGIINA 202 (340)
Q Consensus 175 ~~~~~~v~K~Y~Aiv~G~~~~~~g~i~~ 202 (340)
.-.|+|.|.+..-...++..++.
T Consensus 75 -----~~~K~Y~~~~~~g~~t~t~d~~~ 97 (215)
T 2aus_C 75 -----PAGKEYVALMHLHGDVPEDKIRA 97 (215)
T ss_dssp -----TCCEEEEEEEEESSCCCHHHHHH
T ss_pred -----CCCCEEEEEEEECCCCCCCHHHE
T ss_conf -----58859999988723444440013