HHsearch alignment of GI: 254780610 and MMDB domain: 2cqj_A_
>2cqj_A (A:) BRMS2, U3 small nucleolar ribonucleoprotein protein IMP3 homolog; S4 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.80 E-value=1.4e-05 Score=52.59 Aligned_cols=55 Identities=13% Similarity=0.079 Sum_probs=46.3
Q ss_pred HHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCC--CEEEEE
Q ss_conf 13687578999987176889899999998599049989932867580489--889997
Q gi|254780610|r 19 STAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPG--DSFLIT 74 (340)
Q Consensus 19 ~~~g~RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~g--d~I~i~ 74 (340)
+...+|||.+|.+.-. .-|+.+++++|..|.|+|||++++.|++.|..| |.|.+.
T Consensus 4 ~~lerRLd~~l~~~g~-a~s~~~Ar~lI~~G~V~Vng~~v~~Ps~~v~~~~~d~I~~~ 60 (71)
T 2cqj_A 4 GSSGRRLPTVLLKLRM-AQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWV 60 (71)
T ss_dssp SCCEEEHHHHHHHTTC-SSSHHHHHHHHHTTCEEETTBCCCCTTCEEEHHHHTTEEES
T ss_pred HHHHCCHHHHHHHHCC-CCCHHHHHHHHHHCEEEECCEEECCCCEEECCCCCCEEEEE
T ss_conf 3444126899998055-27899999999849899899995569858358998869984