HHsearch alignment of GI: 254780610 and MMDB domain: 3i1m_D_97-190
>3i1m_D (D:97-190) 30S ribosomal protein S4; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_D* 3e1a_R 3e1c_R 1vs5_D 3i1o_D 3i1q_D 3i1s_D 3i1z_D 3i21_D 2qal_D* 1p6g_D 1p87_D 2aw7_D 2avy_D 2i2u_D 2i2p_D* 2qan_D* 2qb9_D* 2qbb_D* 2qbd_D ...
Probab=98.14 E-value=1.3e-06 Score=58.77 Aligned_cols=52 Identities=23% Similarity=0.218 Sum_probs=46.2
Q ss_pred CHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEEEC
Q ss_conf 57899998717688989999999859904998993286758048988999705
Q gi|254780610|r 24 RIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITVP 76 (340)
Q Consensus 24 RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd~I~i~~~ 76 (340)
|||.||-+.- -.-|+.+++++|..|.|+|||+++..|++.|++||.|.+...
T Consensus 1 RLD~~l~r~g-fa~S~~~ARqlI~hghv~VNg~~v~~ps~~vk~gD~i~i~~~ 52 (94)
T 3i1m_D 1 RLDNVVYRMG-FGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREK 52 (94)
T ss_dssp STTHHHHTTT-SCSSHHHHHHHHHTTCEESSSSBCCSTTCCCCTTCCEEECSS
T ss_pred HHHHHHHHCC-HHHHHHHHHHHHHHCCEECCCEEEEEEEEEECCCCEEEECCC
T ss_conf 8888866031-254099999999850376088799763177058977886232