HHsearch results for GI: 254780610 and protein with PDBid: 1dm9_A

>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A

Probab=98.51  E-value=2.9e-07  Score=61.80  Aligned_cols=56  Identities=23%  Similarity=0.358  Sum_probs=46.8

Q ss_pred             HHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEEEC
Q ss_conf             1368757899998717688989999999859904998993286758048988999705
Q gi|254780610|r   19 STAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITVP   76 (340)
Q Consensus        19 ~~~g~RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd~I~i~~~   76 (340)
                      ...++|||+||...-. --||+.+.++|++|.|+|||+++ ++++.|..||.|.+...
T Consensus         5 ~~~~mRlD~~L~~~r~-~KtRs~A~~~i~~G~V~vNg~~~-K~s~~v~~gD~i~i~~~   60 (133)
T 1dm9_A            5 PAVEVRLDKWLWAARF-YKTRALAREMIEGGKVHYNGQRS-KPSKIVELNATLTLRQG   60 (133)
T ss_dssp             CTTCCBHHHHHHHTTS-SSSHHHHHHHHHTTCEEETTEEC-CTTCBCCTTCEEEEEET
T ss_pred             CCCCEEHHHHHHHHHH-HHHHHHHHHHHHCCCEEECCEEC-CCCCCCCCCCEEEEEEC
T ss_conf             8886863899987162-50499999999869479899646-76666889998999868