HHsearch results for GI: 254780610 and protein with PDBid: 2k6p_A

>2k6p_A Uncharacterized protein HP_1423; alpha-L motif, RNA-binding, unknown function; NMR {Helicobacter pylori}
Probab=99.57  E-value=1.5e-16  Score=117.17  Aligned_cols=87  Identities=20%  Similarity=0.221  Sum_probs=74.3

Q ss_pred             CCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEEECCCH-HCCHHHHHHHHHHCCCCCEEEE
Q ss_conf             757899998717688989999999859904998993286758048988999705601-1110233222221014402789
Q gi|254780610|r   23 GRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITVPAAQ-KLNIAQENIPLDILYEDDDIIV  101 (340)
Q Consensus        23 ~RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd~I~i~~~~~~-~~~~~~~~~~~~IlyED~~llv  101 (340)
                      +|||+||...++ ..||+.++++|++|.|+|||+++ +++++|..||.|.+..+... ...+.+.+.++.|+|||++++|
T Consensus         1 mRlDk~L~~~~~-~~SRs~~~~lI~~G~V~vng~~~-k~s~~V~~Gd~i~i~~~~~~~~~~v~~i~~~~~i~~ED~~l~i   78 (92)
T 2k6p_A            1 MRIDKFLQSVGL-VKRRVLATDMCNVGAVWLNGSCA-KASKEVKAGDTISLHYLKGIEEYTILQIPALKNVPRKDTHLYI   78 (92)
T ss_dssp             CBHHHHSTTTTS-CCCCCSSCCHHHHTCCEETTEEC-CTTCBCCTTCEEEECCSSCCEEEEECCCCCCSCCCSSSTTSSE
T ss_pred             CCHHHHHHHCCC-CCCHHHHHHHHHCCCEEECCEEE-EECCEECCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHCCCE
T ss_conf             977899987377-37999999999889289799997-5236827999999983897079999978865798525518269


Q ss_pred             EECCCHHHCC
Q ss_conf             9624011104
Q gi|254780610|r  102 INKPAGLVVH  111 (340)
Q Consensus       102 inKPaGl~vh  111 (340)
                      +|||+||--|
T Consensus        79 i~K~~~le~~   88 (92)
T 2k6p_A           79 APKTKELEHH   88 (92)
T ss_dssp             EECCCC----
T ss_pred             ECCHHCCCCC
T ss_conf             8060046344