HHsearch results for GI: 254780610 and protein with PDBid: 2olw_A
>2olw_A Ribosomal large subunit pseudouridine synthase E; bifurcated beta sheet, isomerase; 1.60A {Escherichia coli}
Probab=100.00 E-value=2.9e-35 Score=228.61 Aligned_cols=162 Identities=24% Similarity=0.282 Sum_probs=108.7
Q ss_pred CCCCCEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHH
Q ss_conf 01440278996240111045678754210022222210244334444364324444332324057212035788889999
Q gi|254780610|r 93 LYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQF 172 (340)
Q Consensus 93 lyED~~llvinKPaGl~vhp~~~~~~~tl~~~l~~~~~~~~~~~~~~~~~~lVHRLDr~TSGlll~Ak~~~a~~~l~~~f 172 (340)
..|+..++++|||+|++||++......|+.+.+. ..+.++|||||++||||||||++..++..+..
T Consensus 35 ~~~~~~~iv~NKP~G~l~~~~d~~~~~tl~~~l~------------~~~l~~VhRLDrdTSGLll~akd~~~~~~l~~-- 100 (217)
T 2olw_A 35 ENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIP------------VQGVYAAGRLDRDSEGLLVLTNNGALQARLTQ-- 100 (217)
T ss_dssp --CCCCEEEEEECTTBCSCSSCCTTSBCGGGTCC------------CCSCEESSCCCTTCEEEEEEESCHHHHHHHHC--
T ss_pred CCCCCEEEEEECCCCEEECCCCCCCCCCHHHHCC------------CCCCEECCCCCCCCCCEEEEECCHHHHHHHCC--
T ss_conf 8899989999899984874779988976899668------------45834875578677881898277678765326--
Q ss_pred HHHCCCCCEEEEEEEEEECCCCCCCCCC-CCCC-CCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCEEEE
Q ss_conf 9721132213344543202433233211-0013-4344433221234445555530000122210112566775001234
Q gi|254780610|r 173 VDHGKSTRLKRAYYAMVWGIPLPDSGII-NAPL-GRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKC 250 (340)
Q Consensus 173 ~~~~~~~~v~K~Y~Aiv~G~~~~~~g~i-~~~l-~~~~~~~~~~~~~~~~~~~~k~a~T~~~~l~~~~~~~~~~~slv~~ 250 (340)
..+.+.|.|+|+|.|.+.++.+.. ...+ ..+... ........+......+.+.+ +. ......+|++++
T Consensus 101 ----~~~~i~K~Y~a~v~g~~~~~~~~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~s~l~i 170 (217)
T 2olw_A 101 ----PGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPT-LPAGAELVDEPAWLWPRNPP--IR---ERKSIPTSWLKI 170 (217)
T ss_dssp ----TTCCCCEEEEEEEESCCCHHHHHHHHHCCEETTEEC-CCCEEEEECCCTTCCCCSSC--CC----CCSSCEEEEEE
T ss_pred ----CCCEEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCC-CCCEEEEECCCCCCCCEEEE--EE---EECCCCEEEEEE
T ss_conf ----876156899999934799999999876982378603-33169995266442301136--88---621576068999
Q ss_pred EECHHHHHHHHHHHHHHCCEEECCCCCC
Q ss_conf 4311589999999987097860415447
Q gi|254780610|r 251 HLETGRTHQIRVHMAHKGNPLIGDPLYG 278 (340)
Q Consensus 251 ~~~TGRtHQIRvhla~lG~PIvGD~~YG 278 (340)
.|.||||||||+||+++||||++...+.
T Consensus 171 ~l~tGRtHQIR~hl~~lG~pI~~L~Ri~ 198 (217)
T 2olw_A 171 TLYEGRNRQVRRMTAHVGFPTLRLIRYA 198 (217)
T ss_dssp EESCCCTTHHHHHHHHTTCCEEEEEEEE
T ss_pred EEECCCHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 9624854999999998699798989999