HHsearch results for GI: 254780610 and protein with PDBid: 2vqe_D
>2vqe_D 30S ribosomal protein S4; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: d.66.1.2 PDB: 1hnw_D* 1hnx_D* 1hnz_D* 1ibk_D* 1fka_D* 1ibm_D 1xmo_D* 1ibl_D* 1xnq_D* 1xnr_D* 1yl4_G 2b64_D* 2b9m_D* 2b9o_D* 2hgi_G 2hgp_G 2hgr_G 2hhh_D* 1xmq_D* 2j02_D* ...
Probab=98.11 E-value=5.1e-06 Score=54.36 Aligned_cols=54 Identities=28% Similarity=0.413 Sum_probs=47.3
Q ss_pred CCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEEE
Q ss_conf 6875789999871768898999999985990499899328675804898899970
Q gi|254780610|r 21 AEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITV 75 (340)
Q Consensus 21 ~g~RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd~I~i~~ 75 (340)
-+.|||+.+-+. .-.-|+.+++++|..|.|.|||+++..|++.|++||.|.+.-
T Consensus 97 LE~RlD~vv~r~-g~a~s~~~ARQ~v~Hghv~vng~~v~ips~~~k~gd~i~~~~ 150 (209)
T 2vqe_D 97 LESRLDNVVYRL-GFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAE 150 (209)
T ss_dssp HHTBHHHHHHHT-TSSSSHHHHHHHHHTTCEEETTEECCCTTCBCCTTCEEEECG
T ss_pred HHHHHHHHHHHC-CCCCCHHHHHHHHHHCCEECCCEEECCCCEECCCCCEEEECC
T ss_conf 999889999834-751799999999873073219979735886827999998610