HHSEARCH alignment of GI: 254780610 and SCOP domain: d1dm9a_

Alignment

Probab=98.55  E-value=1.1e-07  Score=62.88  Aligned_cols=55  Identities=24%  Similarity=0.356  Sum_probs=46.7

Q ss_pred             CCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEEECC
Q ss_conf             687578999987176889899999998599049989932867580489889997056
Q gi|254780610|r   21 AEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITVPA   77 (340)
Q Consensus        21 ~g~RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd~I~i~~~~   77 (340)
                      +.+|||+||-..-. .-||+.++++|.+|.|+|||+++ ++++.|+.||.|.+..+.
T Consensus         3 ~~mRlD~~L~~~r~-~ktR~~A~~~i~~G~V~vNg~~v-Kps~~vk~GDvI~i~~~~   57 (104)
T d1dm9a_           3 VEVRLDKWLWAARF-YKTRALAREMIEGGKVHYNGQRS-KPSKIVELNATLTLRQGN   57 (104)
T ss_dssp             TCCBHHHHHHHTTS-SSSHHHHHHHHHTTCEEETTEEC-CTTCBCCTTCEEEEEETT
T ss_pred             CCEEHHHHHHHHHH-HHHHHHHHHHHHCCCEEECCEEC-CCCCCCCCCCEEEEEECC
T ss_conf             63768999998221-72099999999839715487414-555568999999998689

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Heat shock protein 15 kD
domain: Heat shock protein 15 kD
species: Escherichia coli [TaxId: 562]