Probab=100.00 E-value=0 Score=446.56 Aligned_cols=237 Identities=44% Similarity=0.705 Sum_probs=199.1
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHH
Q ss_conf 23322222101440278996240111045678754210022222210244334444364324444332324057212035
Q gi|254780610|r 84 AQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDL 163 (340)
Q Consensus 84 ~~~~~~~~IlyED~~llvinKPaGl~vhp~~~~~~~tl~~~l~~~~~~~~~~~~~~~~~~lVHRLDr~TSGlll~Ak~~~ 163 (340)
.|++++++|||||++|+|||||+||+|||++++..+|+++.+..++... ....++++||||||+||||||||||+.
T Consensus 2 ~P~~~~l~IlyeD~~~ivvnKP~gl~~hp~~~~~~~t~~~~l~~~~~~~----~~~~~~~~vHRLDr~TSGlll~Ak~~~ 77 (250)
T d1v9fa_ 2 EPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPI----ADVPRAGIVHRLDKDTTGLMVVAKTVP 77 (250)
T ss_dssp CCCCCCCCEEEECSSEEEEEECSSCCSSCBTTBSSSSHHHHHHHHCGGG----GGSGGGGBCCCCCTTCEEEEEEESSHH
T ss_pred CCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHC----CCCCCEEEEEECCCCCCCEEEEECCCH
T ss_conf 8888997789978999999999998780799999845999999973650----488742577514888765178851527
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCC
Q ss_conf 78888999997211322133445432024332332110013434443322123444555553000012221011256677
Q gi|254780610|r 164 AHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNF 243 (340)
Q Consensus 164 a~~~l~~~f~~~~~~~~v~K~Y~Aiv~G~~~~~~g~i~~~l~~~~~~~~~~~~~~~~~~~~k~a~T~~~~l~~~~~~~~~ 243 (340)
+++.|+++|. ++.|.|+|+|+|.|.++. .+.++.|+.........+.+ .+.|++|.|+|++++.. .
T Consensus 78 a~~~l~~~f~----~~~v~K~Y~a~~~g~~~~-~~~~~~~~~~~~~~~~~~~~----~~~gk~a~T~~~~l~~~-----~ 143 (250)
T d1v9fa_ 78 AQTRLVESLQ----RREITREYEAVAIGHMTA-GGTVDEPISRHPTKRTHMAV----HPMGKPAVTHYRIMEHF-----R 143 (250)
T ss_dssp HHHHHHHHHH----TTCSEEEEEEEEESCCCC-CEEEECCEEECSSCTTCEEE----CTTSBCCEEEEEEEEEC-----S
T ss_pred HHHHHHHHHC----CCEEEEEEEEEECCCCCC-CCCCCCCCCCCCCCCCEEEE----CCCCEECCCCCHHHHCC-----C
T ss_conf 8886323304----545767744321135464-56623553357766630687----78983444101134405-----6
Q ss_pred CCCEEEEEECHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHCEEEEECCCCCCEEEEE
Q ss_conf 50012344311589999999987097860415447755444334570135544079804432100042468897689998
Q gi|254780610|r 244 AVSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPRNNQDMDFQ 323 (340)
Q Consensus 244 ~~slv~~~~~TGRtHQIRvhla~lG~PIvGD~~YG~~~~~~~~~~~~~~~~~~~~~~r~~LHA~~l~f~hP~t~~~~~f~ 323 (340)
.+||++|+|+||||||||+||+++||||+||.+||+....... ..........+++||+|||++|+|.||.||+.++|+
T Consensus 144 ~~slv~~~~~TGR~HQIRvHla~lG~PIlGD~~YG~~~~~~~~-~~~~~~~~~~~~~r~~LHA~~L~f~hP~t~~~~~~~ 222 (250)
T d1v9fa_ 144 VHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKG-ASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWH 222 (250)
T ss_dssp SEEEEEEEESCCCTTHHHHHHHHTTCCBTTCTTTTCCCCCCTT-CCHHHHHHHHHCCSCSEEEEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCC-CCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEE
T ss_conf 7426887863663279999999859830011157621135444-558788877425264564071153268999869998
Q ss_pred CCCCHHHHHHHHHHHC
Q ss_conf 4997899999998851
Q gi|254780610|r 324 VPIPEDMLTVIRKLNE 339 (340)
Q Consensus 324 aplP~~~~~~l~~L~~ 339 (340)
||+|+||.++|+.|+.
T Consensus 223 aplP~df~~~l~~L~~ 238 (250)
T d1v9fa_ 223 APIPQDMVELIEVMRA 238 (250)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHH
T ss_conf 0790999999999751
class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase RsuA/RluD
domain: Ribosomal large subunit pseudouridine synthase D, RluD
species: Escherichia coli [TaxId: 562]