Probab=96.78 E-value=0.00037 Score=41.87 Aligned_cols=82 Identities=20% Similarity=0.185 Sum_probs=53.0 Q ss_pred CCEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH Q ss_conf 40278996240111045678754210022222210244334444364324444332324057212035788889999972 Q gi|254780610|r 96 DDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDH 175 (340) Q Consensus 96 D~~llvinKPaGl~vhp~~~~~~~tl~~~l~~~~~~~~~~~~~~~~~~lVHRLDr~TSGlll~Ak~~~a~~~l~~~f~~~ 175 (340) ...+++||||.|+.+| .+++.+...++. .+.|-..-||-..||||++|-+..+ .+...|. T Consensus 28 ~~G~l~idKP~G~TS~--------~vv~~ikk~l~~--------kKvGH~GTLDP~AtGvL~v~iG~aT--Kl~~~~~-- 87 (230) T d2apoa2 28 KYGVVVVDKPRGPTSH--------EVSTWVKKILNL--------DKAGHGGTLDPKVTGVLPVALERAT--KTIPMWH-- 87 (230) T ss_dssp HTEEEEEEECSSSCHH--------HHHHHHHHHTTC--------SCEEESSCCCTTCEEEEEEEEGGGG--GGGGGTT-- T ss_pred CCCEEEEECCCCCCHH--------HHHHHHHHHCCC--------CCCCCCCCCCCCCEEEEEEEECHHH--HHHHHHH-- T ss_conf 6828999789989889--------999999997187--------8877665467201246666533888--9999984-- Q ss_pred CCCCCEEEEEEEEEECCCCCCCCCCC Q ss_conf 11322133445432024332332110 Q gi|254780610|r 176 GKSTRLKRAYYAMVWGIPLPDSGIIN 201 (340) Q Consensus 176 ~~~~~v~K~Y~Aiv~G~~~~~~g~i~ 201 (340) .-.|+|.|.+.=....+...|. T Consensus 88 ----~~~K~Y~~~~~~g~~t~~~di~ 109 (230) T d2apoa2 88 ----IPPKEYVCLMHLHRDASEEDIL 109 (230) T ss_dssp ----SSCEEEEEEEEESSCCCHHHHH T ss_pred ----CCCCEEEEEEEEECCCCHHHHH T ss_conf ----1684599999961343076798
class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase II TruB
domain: Pseudouridine synthase II TruB
species: Archaeon Methanococcus jannaschii [TaxId: 2190]