Probab=97.22 E-value=0.0002 Score=43.48 Aligned_cols=71 Identities=21% Similarity=0.334 Sum_probs=50.1 Q ss_pred CCEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH Q ss_conf 40278996240111045678754210022222210244334444364324444332324057212035788889999972 Q gi|254780610|r 96 DDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDH 175 (340) Q Consensus 96 D~~llvinKPaGl~vhp~~~~~~~tl~~~l~~~~~~~~~~~~~~~~~~lVHRLDr~TSGlll~Ak~~~a~~~l~~~f~~~ 175 (340) ...+++||||.|+.+| .+++.+...+.. .+.|-...||-..||||++|-+.. ..+...|. T Consensus 41 ~~G~l~idKP~G~TS~--------~vv~~vkk~l~~--------kKvGH~GTLDP~AtGvL~i~iG~a--TKl~~~~~-- 100 (245) T d2ey4a2 41 QFGVINLDKPPGPTSH--------EVVAWIKKILNL--------EKAGHGGTLDPKVSGVLPVALEKA--TRVVQALL-- 100 (245) T ss_dssp HTEEEEEEECSSSCHH--------HHHHHHHHHTTC--------SCEEESSCCCTTCEEEEEEEEGGG--GGGHHHHT-- T ss_pred CCCEEEEECCCCCCHH--------HHHHHHHHHHCC--------CCCCCCCCCCCCCEEEEEEEECHH--HHHHHHHC-- T ss_conf 7828999679979889--------999999987176--------777757658975155678884488--88999966-- Q ss_pred CCCCCEEEEEEEEEE Q ss_conf 113221334454320 Q gi|254780610|r 176 GKSTRLKRAYYAMVW 190 (340) Q Consensus 176 ~~~~~v~K~Y~Aiv~ 190 (340) .-.|+|.|.+. T Consensus 101 ----~~~K~Y~~~~~ 111 (245) T d2ey4a2 101 ----PAGKEYVALMH 111 (245) T ss_dssp ----TSCEEEEEEEE T ss_pred ----CCCCEEEEEEE T ss_conf ----17848999888
class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase II TruB
domain: Pseudouridine synthase II TruB
species: Archaeon Pyrococcus furiosus [TaxId: 2261]