BLAST/PSIBLAST alignment of GI: 254780610 and GI: 190893167 at iteration 1
>gi|190893167|ref|YP_001979709.1| RNA-pseudouridylate synthase, ribosomal large subunit D [Rhizobium etli CIAT 652] Length = 354
>gi|190698446|gb|ACE92531.1| RNA-pseudouridylate synthase protein, ribosomal large subunit D [Rhizobium etli CIAT 652] Length = 354
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/334 (56%), Positives = 244/334 (73%), Gaps = 2/334 (0%)
Query: 7 NCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVV 66
+ I+ L +D TAEGR+D WL L E+FSRS +K+LI +G +S+ G + +P RKV
Sbjct: 20 QAAGIRKVLTADETAEGRLDAWLTAQLGEEFSRSRIKVLIKDGQVSMRGQLITDPQRKVR 79
Query: 67 PGDSFLITVPAAQKLNIAQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALL 126
GDSF IT+P + E+IPLDILYEDDD+IVI+KPAGLVVHP GNWTGTLVNAL+
Sbjct: 80 AGDSFEITLPEPEDPTPQGEDIPLDILYEDDDLIVISKPAGLVVHPGSGNWTGTLVNALI 139
Query: 127 YHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYY 186
+HC LS I GV+RPGIVHRLDKDTTGVMVVAKND+AH+ LS QF DHG++ L+RAY
Sbjct: 140 HHCGATLSGIGGVRRPGIVHRLDKDTTGVMVVAKNDVAHRHLSLQFADHGRTMPLERAYR 199
Query: 187 AMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNK--NSNFA 244
A+VWG P +G ++APLGR +R RRAVK D + AD AITHY+ IE +++ ++
Sbjct: 200 AIVWGRPRSLTGTVDAPLGRATGDRTRRAVKRPDSQDADEAITHYEVIERFHETPDATAL 259
Query: 245 VSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLARQAL 304
SL++C LETGRTHQIRVHMAH G+PL+GD +YG GF+TKAN++ + + + RQAL
Sbjct: 260 ASLVECRLETGRTHQIRVHMAHIGHPLLGDTVYGAGFRTKANLLPEDIRKVVNRFDRQAL 319
Query: 305 HAHSLSFSHPRNNQDMDFQVPIPEDMLTVIRKLN 338
HA L F HPR+ + M F+VP+P+DM+ ++ L
Sbjct: 320 HAFMLQFEHPRSGELMHFEVPLPDDMVELVEALR 353