BLAST/PSIBLAST alignment of GI: 254780610 and GI: 209550662 at iteration 1
>gi|209550662|ref|YP_002282579.1| pseudouridine synthase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 341
>gi|209536418|gb|ACI56353.1| pseudouridine synthase, RluA family [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 341
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/339 (55%), Positives = 239/339 (70%), Gaps = 2/339 (0%)
Query: 1 MQQTLDNCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKN 60
M + + L +D TAEGR+D WL + E+FSRS +K LI +G +S+ G +
Sbjct: 1 MSDPFKQAAGNRKVLTADETAEGRLDAWLTAQVGEEFSRSRIKALIKDGQVSLRGEPVTD 60
Query: 61 PNRKVVPGDSFLITVPAAQKLNIAQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGT 120
P RKV GDSF IT+P + E+IPLDIL+ED+D+IVI+KP+GLVVHP GNWTGT
Sbjct: 61 PQRKVRNGDSFEITLPEPEDPTPQGEDIPLDILHEDEDLIVISKPSGLVVHPGSGNWTGT 120
Query: 121 LVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTR 180
LVNAL++HC + LS I GV+RPGIVHRLDKDTTGVMVVAKND+AH+ LS QF DHG++
Sbjct: 121 LVNALIHHCGDTLSGIGGVRRPGIVHRLDKDTTGVMVVAKNDIAHRHLSLQFADHGRTMP 180
Query: 181 LKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKN 240
L+RAY A+VWG P +G ++APLGR +R RRAVK D AD AITHY+ IE + +N
Sbjct: 181 LERAYQAVVWGRPRSLTGTVDAPLGRATGDRTRRAVKRPDSHDADEAITHYEVIERFQEN 240
Query: 241 SNFA--VSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILS 298
+ SL++CHLETGRTHQIRVHMAH G+PL+GD +YG GFKTKAN + + +
Sbjct: 241 PDATALASLVECHLETGRTHQIRVHMAHIGHPLLGDTVYGAGFKTKANRLPEEVRKVVNG 300
Query: 299 LARQALHAHSLSFSHPRNNQDMDFQVPIPEDMLTVIRKL 337
RQALHA L F HPR + M F+VP+P+DM+ ++ L
Sbjct: 301 FNRQALHAFMLQFEHPRTGELMHFEVPLPDDMVELVEAL 339