BLAST/PSIBLAST alignment of GI: 254780610 and GI: 209550662 at iteration 1
>gi|209550662|ref|YP_002282579.1| pseudouridine synthase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 341
>gi|209536418|gb|ACI56353.1| pseudouridine synthase, RluA family [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 341
 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/339 (55%), Positives = 239/339 (70%), Gaps = 2/339 (0%)

Query: 1   MQQTLDNCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKN 60
           M       +  +  L +D TAEGR+D WL   + E+FSRS +K LI +G +S+ G    +
Sbjct: 1   MSDPFKQAAGNRKVLTADETAEGRLDAWLTAQVGEEFSRSRIKALIKDGQVSLRGEPVTD 60

Query: 61  PNRKVVPGDSFLITVPAAQKLNIAQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGT 120
           P RKV  GDSF IT+P  +      E+IPLDIL+ED+D+IVI+KP+GLVVHP  GNWTGT
Sbjct: 61  PQRKVRNGDSFEITLPEPEDPTPQGEDIPLDILHEDEDLIVISKPSGLVVHPGSGNWTGT 120

Query: 121 LVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTR 180
           LVNAL++HC + LS I GV+RPGIVHRLDKDTTGVMVVAKND+AH+ LS QF DHG++  
Sbjct: 121 LVNALIHHCGDTLSGIGGVRRPGIVHRLDKDTTGVMVVAKNDIAHRHLSLQFADHGRTMP 180

Query: 181 LKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKN 240
           L+RAY A+VWG P   +G ++APLGR   +R RRAVK  D   AD AITHY+ IE + +N
Sbjct: 181 LERAYQAVVWGRPRSLTGTVDAPLGRATGDRTRRAVKRPDSHDADEAITHYEVIERFQEN 240

Query: 241 SNFA--VSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILS 298
            +     SL++CHLETGRTHQIRVHMAH G+PL+GD +YG GFKTKAN +    +  +  
Sbjct: 241 PDATALASLVECHLETGRTHQIRVHMAHIGHPLLGDTVYGAGFKTKANRLPEEVRKVVNG 300

Query: 299 LARQALHAHSLSFSHPRNNQDMDFQVPIPEDMLTVIRKL 337
             RQALHA  L F HPR  + M F+VP+P+DM+ ++  L
Sbjct: 301 FNRQALHAFMLQFEHPRTGELMHFEVPLPDDMVELVEAL 339