BLAST/PSIBLAST alignment of GI: 254780610 and GI: 222149596 at iteration 1
>gi|222149596|ref|YP_002550553.1| ribosomal large subunit pseudouridine synthase RluD subfamily [Agrobacterium vitis S4] Length = 342
>gi|221736578|gb|ACM37541.1| ribosomal large subunit pseudouridine synthase RluD subfamily [Agrobacterium vitis S4] Length = 342
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/341 (53%), Positives = 232/341 (68%), Gaps = 3/341 (0%)
Query: 1 MQQTLDNCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKN 60
M + L++ AEGR+D WLA SL SR+ VK LI G + +NG
Sbjct: 1 MTDPFKQAGEPRKELIAGEDAEGRLDAWLAASLGGDLSRNRVKALIEQGAVFVNGTAVTE 60
Query: 61 PNRKVVPGDSFLITVPAAQKLNIAQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGT 120
P RK+ PGD +I +P + E+IPL +LYED D+IV++KPAGLVVHP GNWTGT
Sbjct: 61 PKRKIKPGDQLVIAMPEPEDPEPKGEDIPLTVLYEDKDLIVLSKPAGLVVHPGAGNWTGT 120
Query: 121 LVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTR 180
LVNAL++HC ++LS I GVKRPGIVHRLDK+T+GVMVVAKND+AH+ L++QF DHG+S
Sbjct: 121 LVNALIHHCGDSLSGIGGVKRPGIVHRLDKETSGVMVVAKNDIAHRHLADQFADHGRSGP 180
Query: 181 LKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNK- 239
L+RAY A+VWG P G I+A LGR +R +R VK D A AITHYQ +E Y +
Sbjct: 181 LERAYQALVWGRPRGLRGTIDAALGRA-GDRTKRTVKREDTDDAREAITHYQVMERYGEK 239
Query: 240 -NSNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILS 298
++ SL++C LETGRTHQIRVHMAH G+PLIGDP YG FKTKAN++ + AK+ + +
Sbjct: 240 PDATCLASLVECRLETGRTHQIRVHMAHIGHPLIGDPEYGAAFKTKANLLPDAAKAIVTN 299
Query: 299 LARQALHAHSLSFSHPRNNQDMDFQVPIPEDMLTVIRKLNE 339
RQALHA+ L+F HP M F PIP+DM T+IR L +
Sbjct: 300 FHRQALHAYLLAFEHPTTGDVMHFAAPIPDDMETIIRALRD 340