RPSBLAST alignment for GI: 254780610 and conserved domain: TIGR01621

>gnl|CDD|130682 TIGR01621, RluA-like, pseudouridine synthase Rlu family protein, TIGR01621. This model represents a clade of sequences within the pseudouridine synthase superfamily (pfam00849). The superfamily includes E. coli proteins: RluA, RluB, RluC, RluD, and RsuA. The sequences modeled here are most closely related to RluA. Neisseria, among those species hitting this model, does not appear to have an RluA homolog. It is presumed that these sequences function as pseudouridine synthases, although perhaps with different specificity. Length = 217
 Score = 96.1 bits (239), Expect = 1e-20
 Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 41/229 (17%)

Query: 90  LDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLD 149
            +IL+   D ++INK  G+ VH   G  TG L           +++  GV +  +VHRLD
Sbjct: 2   FEILFTHPDFLLINKHPGISVHKDDGE-TGLL---------QEVATQLGVGQVWLVHRLD 51

Query: 150 KDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKS 209
           K T+G++++A N  +  +LS+ F       ++++ Y A+    P    G+I   +     
Sbjct: 52  KMTSGILLLALNAESASELSQGFAKR----KIEKTYLALSSKKPKKKQGLICGDM----- 102

Query: 210 NRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAHKGN 269
            + RR    + +   + AIT + +         F   +LK H  TG+THQ+RV M   G+
Sbjct: 103 EKSRRGSWKLVNSQENPAITRFFSASAATGLRLF---ILKPH--TGKTHQLRVAMKSLGS 157

Query: 270 PLIGDPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPRNNQ 318
           P++GDPLYG   ++                 R  LHA +L F + +N  
Sbjct: 158 PILGDPLYGTTDESD----------------RGYLHAFALRFDY-QNEV 189