RPSBLAST alignment for GI: 254780610 and conserved domain: PRK11112

>gnl|CDD|182971 PRK11112, PRK11112, tRNA pseudouridine synthase C; Provisional. Length = 257
 Score =  116 bits (293), Expect = 7e-27
 Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 47/265 (17%)

Query: 90  LDILYEDDDIIVINKPAGLVVHPAPGNWTG---------TLVNALLYHCHNNLSSINGVK 140
           L+ILY+D+ ++ +NKPAG +VH +   W           T+ + +  H            
Sbjct: 2   LEILYQDEWLVAVNKPAGWLVHRS---WLDRHETVFVMQTVRDQIGQHVFT--------- 49

Query: 141 RPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGII 200
                HRLD+ T+GV+++A +    + L++QF  H    ++++ Y+A+V G  L +  ++
Sbjct: 50  ----AHRLDRPTSGVLLMALSSEVARLLAQQFEQH----QIQKTYHAIVRGW-LMEEAVL 100

Query: 201 NAPLGRCKSNRLRRAVKGID-DKTADSAITHYQ---TIEIYNKNSNFAV---SLLKCHLE 253
           + PL   K    + A K    DK    A+THY+   T+E+      +     SL++   +
Sbjct: 101 DYPL---KEELDKIADKFAREDKAPQPAVTHYRGLATVEMPVATGRYPTTRYSLVELEPK 157

Query: 254 TGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSH 313
           TGR HQ+R HMAH  +P+IGD  +G       ++  N + +     +R  LHA  LS +H
Sbjct: 158 TGRKHQLRRHMAHLRHPIIGDTKHG-------DLRQNRSLAEHFGCSRLMLHASELSLTH 210

Query: 314 PRNNQDMDFQVPIPEDMLTVIRKLN 338
           P   + +     + E    ++ +  
Sbjct: 211 PFTGEPLTITAGLDETWQQLLSQFG 235