RPSBLAST alignment for GI: 254780610 and conserved domain: PRK11112
>gnl|CDD|182971 PRK11112, PRK11112, tRNA pseudouridine synthase C; Provisional. Length = 257
Score = 116 bits (293), Expect = 7e-27
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 47/265 (17%)
Query: 90 LDILYEDDDIIVINKPAGLVVHPAPGNWTG---------TLVNALLYHCHNNLSSINGVK 140
L+ILY+D+ ++ +NKPAG +VH + W T+ + + H
Sbjct: 2 LEILYQDEWLVAVNKPAGWLVHRS---WLDRHETVFVMQTVRDQIGQHVFT--------- 49
Query: 141 RPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGII 200
HRLD+ T+GV+++A + + L++QF H ++++ Y+A+V G L + ++
Sbjct: 50 ----AHRLDRPTSGVLLMALSSEVARLLAQQFEQH----QIQKTYHAIVRGW-LMEEAVL 100
Query: 201 NAPLGRCKSNRLRRAVKGID-DKTADSAITHYQ---TIEIYNKNSNFAV---SLLKCHLE 253
+ PL K + A K DK A+THY+ T+E+ + SL++ +
Sbjct: 101 DYPL---KEELDKIADKFAREDKAPQPAVTHYRGLATVEMPVATGRYPTTRYSLVELEPK 157
Query: 254 TGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSH 313
TGR HQ+R HMAH +P+IGD +G ++ N + + +R LHA LS +H
Sbjct: 158 TGRKHQLRRHMAHLRHPIIGDTKHG-------DLRQNRSLAEHFGCSRLMLHASELSLTH 210
Query: 314 PRNNQDMDFQVPIPEDMLTVIRKLN 338
P + + + E ++ +
Sbjct: 211 PFTGEPLTITAGLDETWQQLLSQFG 235