RPSBLAST alignment for GI: 254780610 and conserved domain: cd02558

>gnl|CDD|30015 cd02558, PSRA_1, PSRA_1: Pseudouridine synthase, a subgroup of the RluA family. This group is comprised of bacterial proteins assigned to the RluA family of pseudouridine synthases. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. The RluA family is comprised of proteins related to Escherichia coli RluA. . Length = 246

 Score = 79.1 bits (195), Expect = 2e-15
 Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 33/201 (16%)

Query: 84  AQENIPLD--ILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKR 141
            +  IP +  IL++D+ ++V +KP  L V P     T TL+  L              ++
Sbjct: 31  DEPPIPFEETILHQDEHLLVADKPHFLPVTPRGRYVTETLLVRL-------------RRQ 77

Query: 142 PGI-----VHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPD 196
            G       HRLD+ T G+++ +K           F        + + Y A+   +P   
Sbjct: 78  TGNPDLTPAHRLDRLTAGLVLFSKRPETRGAYQTLFARR----EVSKTYEAVAPYVPA-- 131

Query: 197 SGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGR 256
                        +R+ +       +  +        IE+  +   + +  L  H  TG+
Sbjct: 132 -----LTFPLTVRSRIVKGRGFFQAREVEGEPNAETRIELLARRGGWGLYRLSPH--TGK 184

Query: 257 THQIRVHMAHKGNPLIGDPLY 277
           THQ+RVHMA  G P++ DP Y
Sbjct: 185 THQLRVHMAALGVPILNDPFY 205