RPSBLAST alignment for GI: 254780610 and conserved domain: cd02563

>gnl|CDD|30016 cd02563, PseudoU_synth_TruC, tRNA pseudouridine isomerase C: Pseudouridine synthases catalyze the isomerization of specific uridines in an tRNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. TruC makes psi65 in tRNAs. This psi residue is not universally conserved.. Length = 223

 Score =  135 bits (342), Expect = 1e-32
 Identities = 77/245 (31%), Positives = 117/245 (47%), Gaps = 29/245 (11%)

Query: 90  LDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLD 149
           L+ILY+D+ ++ INKP+GL+VH +  +   T     L    + L      +    VHRLD
Sbjct: 1   LEILYQDEHLVAINKPSGLLVHRSELDRHETRF--ALQTLRDQLG-----QHVYPVHRLD 53

Query: 150 KDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKS 209
           + T+GV++ A +    +KL EQF +H    R+ + Y A+V G   P+SG I+ PL     
Sbjct: 54  RPTSGVLLFALSSEVARKLGEQFTEH----RVHKTYLAVVRGYV-PESGTIDYPL---SE 105

Query: 210 NRLRRAVKGIDDKTA-DSAITHY---QTIEIYNKNSNFAV---SLLKCHLETGRTHQIRV 262
              + A K   D  A  +A THY      E+      +     SL++    TGR HQ+R 
Sbjct: 106 ELDKLADKFASDDKAPQAATTHYRLLAVEELPVVVGKYPTSRYSLVELTPHTGRKHQLRR 165

Query: 263 HMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPRNNQDMDF 322
           H+AH  +P+IGD  +G G        +N          R  L A  L F+HP   + +  
Sbjct: 166 HLAHIRHPIIGDTTHGDG-------RHNRFFREHFGCHRLLLAATRLEFTHPVTGERLLI 218

Query: 323 QVPIP 327
           + P+ 
Sbjct: 219 EAPLD 223