RPSBLAST alignment for GI: 254780610 and conserved domain: COG1187
>gnl|CDD|31380 COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]. Length = 248
Score = 68.0 bits (166), Expect = 3e-12
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 46/248 (18%)
Query: 24 RIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITVPAAQKLNI 83
R++++LA + SR + LI G +++NG V+ V P D ++ V +++ +
Sbjct: 4 RLNKFLAEAG--VGSRREAEKLIEEGRVTVNGKVATLGGVVVDP-DDDVVEVD-GKRIEL 59
Query: 84 AQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPG 143
+E + +++NKP G V T+ + L KR
Sbjct: 60 KEERV----------YLLLNKPRGYVSSTEDDEGRPTVFDLLPERLPRK-------KRLF 102
Query: 144 IVHRLDKDTTGVMVVAKN-DLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINA 202
V RLDKDT G++++ + +LAH+ + S+ +++ Y V G +
Sbjct: 103 PVGRLDKDTEGLLLLTNDGELAHRLMHP-------SSEVEKEYLVRVEGPVTEE------ 149
Query: 203 PLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRV 262
L + KG+ ++ ++E +N S L+ L GR Q+R
Sbjct: 150 --------DLEKLRKGVTLDDGETKPAKPASLEKEPGKNN---SWLRITLTEGRNRQVRR 198
Query: 263 HMAHKGNP 270
G
Sbjct: 199 MFEAVGLE 206