RPSBLAST alignment of GI: 254780610 and MMDB domain: 1ksk_A_59-234
>1ksk_A (A:59-234) Ribosomal small subunit pseudouridine synthase A; RSUA, lyase; 2.00A {Escherichia coli}Length = 176
Score = 116 bits (291), Expect = 4e-27
Identities = 27/223 (12%), Positives = 58/223 (26%), Gaps = 51/223 (22%)
Query: 94 YEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTT 153
+NKP G V T++ L + RLD DTT
Sbjct: 2 QHGPRYFXLNKPQGYVCSTDDP-DHPTVLYFLDEPV---------AWKLHAAGRLDIDTT 51
Query: 154 GVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLR 213
G+++ + +++ ++ Y + D + +
Sbjct: 52 GLVLXTDDGQWSHRITSPRHHC------EKTYLVTLESPVADD-----------TAEQFA 94
Query: 214 RAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIG 273
+ V+ + + + + + ++ + GR HQ++ A GN ++
Sbjct: 95 KGVQ----------LHNEKDLTKPAVLEVITPTQVRLTISEGRYHQVKRXFAAVGNHVVE 144
Query: 274 DPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPRN 316
G T A +
Sbjct: 145 LHRERIGGITLDA--------------DLAPGEYRPLTEEEIA 173