RPSBLAST alignment of GI: 254780610 and MMDB domain: 1ksk_A_59-234

>1ksk_A (A:59-234) Ribosomal small subunit pseudouridine synthase A; RSUA, lyase; 2.00A {Escherichia coli}Length = 176
 Score =  116 bits (291), Expect = 4e-27
 Identities = 27/223 (12%), Positives = 58/223 (26%), Gaps = 51/223 (22%)

Query: 94  YEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTT 153
                   +NKP G V          T++  L               +     RLD DTT
Sbjct: 2   QHGPRYFXLNKPQGYVCSTDDP-DHPTVLYFLDEPV---------AWKLHAAGRLDIDTT 51

Query: 154 GVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLR 213
           G+++   +     +++            ++ Y   +      D            + +  
Sbjct: 52  GLVLXTDDGQWSHRITSPRHHC------EKTYLVTLESPVADD-----------TAEQFA 94

Query: 214 RAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIG 273
           + V+          + + + +           + ++  +  GR HQ++   A  GN ++ 
Sbjct: 95  KGVQ----------LHNEKDLTKPAVLEVITPTQVRLTISEGRYHQVKRXFAAVGNHVVE 144

Query: 274 DPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPRN 316
                 G  T                   A   +         
Sbjct: 145 LHRERIGGITLDA--------------DLAPGEYRPLTEEEIA 173