RPSBLAST alignment of GI: 254780610 and MMDB domain: 1vio_A_58-243

>1vio_A (A:58-243) Ribosomal small subunit pseudouridine synthase A; structural genomics, lyase; 1.59A {Haemophilus influenzae}Length = 186
 Score =  125 bits (313), Expect = 1e-29
 Identities = 32/222 (14%), Positives = 63/222 (28%), Gaps = 40/222 (18%)

Query: 94  YEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTT 153
            E+    ++NKP G V     G++  T+     Y             +     RLD DTT
Sbjct: 2   IEEGQYFMLNKPQGCVCSNDDGDY-PTIYQFFDYPLA---------GKLHSAGRLDVDTT 51

Query: 154 GVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLR 213
           G++++  +     +++       K+      Y   +      +     A     +  +  
Sbjct: 52  GLVLLTDDGQWSHRITSPKHHCEKT------YLVTLADPVEENYSAACAEGILLRGEK-- 103

Query: 214 RAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIG 273
                                     + N         +  GR HQ++   A  GN ++G
Sbjct: 104 --------------EPTKPAKLEILDDYNV-----NLTISEGRYHQVKRMFAALGNKVVG 144

Query: 274 DPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPR 315
              +  G         +  +     L +  +       SH  
Sbjct: 145 LHRWKIGDVVLD---ESLEEGEYRPLTQSEIEKLVEGGSHHH 183