RPSBLAST alignment of GI: 254780610 and MMDB domain: 1vio_A_58-243
>1vio_A (A:58-243) Ribosomal small subunit pseudouridine synthase A; structural genomics, lyase; 1.59A {Haemophilus influenzae}Length = 186
Score = 125 bits (313), Expect = 1e-29
Identities = 32/222 (14%), Positives = 63/222 (28%), Gaps = 40/222 (18%)
Query: 94 YEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTT 153
E+ ++NKP G V G++ T+ Y + RLD DTT
Sbjct: 2 IEEGQYFMLNKPQGCVCSNDDGDY-PTIYQFFDYPLA---------GKLHSAGRLDVDTT 51
Query: 154 GVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLR 213
G++++ + +++ K+ Y + + A + +
Sbjct: 52 GLVLLTDDGQWSHRITSPKHHCEKT------YLVTLADPVEENYSAACAEGILLRGEK-- 103
Query: 214 RAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIG 273
+ N + GR HQ++ A GN ++G
Sbjct: 104 --------------EPTKPAKLEILDDYNV-----NLTISEGRYHQVKRMFAALGNKVVG 144
Query: 274 DPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPR 315
+ G + + L + + SH
Sbjct: 145 LHRWKIGDVVLD---ESLEEGEYRPLTQSEIEKLVEGGSHHH 183