RPSBLAST alignment of GI: 254780610 and SCOP domain: d1v9ka_

Alignment

 Score =  163 bits (414), Expect = 1e-41
 Identities = 75/246 (30%), Positives = 112/246 (45%), Gaps = 25/246 (10%)

Query: 92  ILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKD 151
           I+YEDD I+V+NKP+G  VH   G   G +                  +   +VHRLD+D
Sbjct: 3   IMYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEA--------RFLELVHRLDRD 54

Query: 152 TTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNR 211
           T+GV++VAK   A + L EQ  + G        Y A+V G        + APL +     
Sbjct: 55  TSGVLLVAKKRSALRSLHEQLREKGMQKD----YLALVRGQWQSHVKSVQAPLLKNILQS 110

Query: 212 LRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAHKGNPL 271
             R V+    +    + T ++  E Y        +L++C   TGRTHQIRVH  + G+P+
Sbjct: 111 GERIVR--VSQEGKPSETRFKVEERYAFA-----TLVRCSPVTGRTHQIRVHTQYAGHPI 163

Query: 272 IGDPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPRNNQDMDFQVPIPEDML 331
             D  YG     +          A   L R  LHA +L F+HP   + M  + P+ E + 
Sbjct: 164 AFDDRYGDREFDR------QLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLK 217

Query: 332 TVIRKL 337
             ++K+
Sbjct: 218 RCLQKM 223

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase RsuA/RluD
domain: Ribosomal large subunit pseudouridine synthase C, RluC
species: Escherichia coli [TaxId: 562]