RPSBLAST alignment of GI: 254780610 and SCOP domain: d1vioa1

Alignment

 Score = 39.9 bits (92), Expect = 3e-04
 Identities = 27/178 (15%), Positives = 51/178 (28%), Gaps = 37/178 (20%)

Query: 95  EDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTG 154
           E+    ++NKP G V     G++  T+     Y     L             RLD DTTG
Sbjct: 1   EEGQYFMLNKPQGCVCSNDDGDYP-TIYQFFDYPLAGKLH---------SAGRLDVDTTG 50

Query: 155 VMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRR 214
           ++++  +                  +      +            +  P+    S     
Sbjct: 51  LVLLTDD-----------------GQWSHRITSPKHHCEKTYLVTLADPVEENYSAACAE 93

Query: 215 AVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAHKGNPLI 272
            +    +K            +            +   +  GR HQ++   A  GN ++
Sbjct: 94  GILLRGEKEPTKPAKLEILDDYN----------VNLTISEGRYHQVKRMFAALGNKVV 141

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase RsuA/RluD
domain: Ribosomal small subunit pseudouridine 516 synthase RsuA
species: Haemophilus influenzae [TaxId: 727]