HHsearch alignment for GI: 254780611 and conserved domain: PRK00118

>PRK00118 putative DNA-binding protein; Validated.
Probab=97.74  E-value=0.00011  Score=50.85  Aligned_cols=54  Identities=28%  Similarity=0.360  Sum_probs=46.0

Q ss_pred             HHHHH-HCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99996-219999999999982788888989999997789999999999999999999
Q gi|254780611|r  228 LTRSM-SVLNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQES  283 (302)
Q Consensus       228 L~~~l-~~L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR~~  283 (302)
T Consensus        10 L~D~Yg~LLT~kQ~~~~~lyy~~D--lSl~EIAe~~~iSRQaV~D~ikr~~~~L~~y   64 (105)
T PRK00118         10 LFDFYQSLLTEKQRNYMELYYLDD--YSLGEIAEEFNVSRQAVYDNIKRTEKLLEDY   64 (105)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHCC--CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             999989875599999999998854--9999998996985999999999999999999